RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 CCSER1Q9C0I3 900 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 PTPRHQ9HD43 1115 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 CNTN3Q9P232 1028 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 MTRRQ9UBK8 725 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 CACNG4Q9UBN1 327 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 BACE2Q9Y5Z0 518 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
CNKSR1-204ENST00000480348 SMIM28A0A1B0GU29 152 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 SYN3O14994 580 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 SPATA31D3P0C874 917 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 ZSCAN22P10073 491 aaPredicted RBP11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 SRFP11831 508 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 KCNE1P15382 129 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 RPL9P32969 192 aaKnown RBP11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 STAT6P42226 847 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 LIG4P49917 911 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 CLCNKBP51801 687 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 NCKAP1LP55160 1127 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 RAB33AQ14088 237 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 SPATA31D4Q6ZUB0 917 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 MTSS1LQ765P7 747 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 SV2BQ7L1I2 683 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 CEP120Q8N960 986 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 CLSTN3Q9BQT9 956 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 PANK2Q9BZ23 570 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 CXCL16Q9H2A7 254 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 WNT16Q9UBV4 365 aa11.77□□□□□ -0.53
CNKSR1-204ENST00000480348 ANK1P16157 1881 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 TCHHQ07283 1943 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 H7C4K7 107 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 HNRNPDLO14979 420 aaKnown RBP11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 SPTLC2O15270 562 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 CLDN3O15551 220 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 XPOTO43592 962 aaKnown RBP11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 TRAK2O60296 914 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 LAMP2P13473 410 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 AOC1P19801 751 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 RFX1P22670 979 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 FSHRP23945 695 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 ALKAL1Q6UXT8 129 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 CCDC73Q6ZRK6 1079 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 DYMQ7RTS9 669 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 SLC7A14Q8TBB6 771 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 ZBTB45Q96K62 511 aaPredicted RBP11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 MYADMQ96S97 322 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 TSPAN18Q96SJ8 248 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 SMOC2Q9H3U7 446 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 NUB1Q9Y5A7 615 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 NOTCH4Q99466 2003 aa11.76□□□□□ -0.53
CNKSR1-204ENST00000480348 TSC2P49815 1807 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 ANHXE9PGG2 379 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 PODXLO00592 558 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 ABLIM1O14639 778 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 F13A1P00488 732 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 OR1D2P34982 312 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 ZNF131P52739 623 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 MCL1Q07820 350 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 HTR4Q13639 388 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 SEZ6Q53EL9 994 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 AXDND1Q5T1B0 1012 aaPredicted RBP11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 CWF19L1Q69YN2 538 aaKnown RBP11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 SLC8B1Q6J4K2 584 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 SIX5Q8N196 739 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 PDILTQ8N807 584 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 TMEM105Q8N8V8 129 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 FLCNQ8NFG4 579 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 ATOH1Q92858 354 aaPredicted RBP11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 PLEKHA5Q9HAU0 1116 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 SLC2A4RGQ9NR83 387 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 CDH7Q9ULB5 785 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 MAFFQ9ULX9 164 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 TBX20Q9UMR3 447 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 POLIQ9UNA4 740 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 CDY1Q9Y6F8 540 aa11.75□□□□□ -0.53
CNKSR1-204ENST00000480348 PROB1E7EW31 1015 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 YEATS4O95619 227 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 CLTAP09496 248 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 MYBP10242 640 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 IDEP14735 1019 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 TKTP29401 623 aaKnown RBP11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 NMT1P30419 496 aaKnown RBP11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 ELF1P32519 619 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 ZNF280DQ6N043 979 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 SFR1Q86XK3 245 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 SLC44A3Q8N4M1 653 aa11.74□□□□□ -0.53
CNKSR1-204ENST00000480348 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms