RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 STRA6Q9BX79 667 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 MRPL9Q9BYD2 267 aaKnown RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 NUP62CLQ9H1M0 184 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 RNF39Q9H2S5 420 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 ST6GALNAC4Q9H4F1 302 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 LIMD1Q9UGP4 676 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 IPPQ9Y573 584 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 COL4A3Q01955 1670 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 PTPRZ1P23471 2315 aaPredicted RBP9.89□□□□□ -0.83
VCP-206ENST00000480327 NOTCH4Q99466 2003 aa9.89□□□□□ -0.83
VCP-206ENST00000480327 N4BP1O75113 896 aaKnown RBP9.88□□□□□ -0.83
VCP-206ENST00000480327 RHOBTB3O94955 611 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 NPR3P17342 541 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 AKAP5P24588 427 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 HOXD13P35453 343 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 CLCN4P51793 760 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 PSMD2Q13200 908 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 ALCAMQ13740 583 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 SLC39A4Q6P5W5 647 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 TMC5Q6UXY8 1006 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 STXBP4Q6ZWJ1 553 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
VCP-206ENST00000480327 MRPL10Q7Z7H8 261 aaKnown RBP9.88□□□□□ -0.83
VCP-206ENST00000480327 ELOA2Q8IYF1 753 aaPredicted RBP9.88□□□□□ -0.83
VCP-206ENST00000480327 CEP120Q8N960 986 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 NOC3LQ8WTT2 800 aaKnown RBP9.88□□□□□ -0.83
VCP-206ENST00000480327 SCFD1Q8WVM8 642 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 HVCN1Q96D96 273 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 CCDC51Q96ER9 411 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 KLHL5Q96PQ7 755 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 HAPLN2Q9GZV7 340 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 CDT1Q9H211 546 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 NXF3Q9H4D5 531 aaKnown RBP9.88□□□□□ -0.83
VCP-206ENST00000480327 DZANK1Q9NVP4 752 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 RMND1Q9NWS8 449 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 MARCH5Q9NX47 278 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 KLK14Q9P0G3 267 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 PARP2Q9UGN5 583 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 MAN1B1Q9UKM7 699 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 EXOC7Q9UPT5 735 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 INPP5FQ9Y2H2 1132 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 ZMYM2Q9UBW7 1377 aa9.88□□□□□ -0.83
VCP-206ENST00000480327 PRR23AA6NEV1 266 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 F8W810 466 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 ABLIM1O14639 778 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
VCP-206ENST00000480327 CLDN3O15551 220 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 PI15O43692 258 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 TOM1L1O75674 476 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 MBD3O95983 291 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 CNPP09543 421 aaKnown RBP9.87□□□□□ -0.83
VCP-206ENST00000480327 SKIP12755 728 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 ITGA4P13612 1032 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 ABCD1P33897 745 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 CA8P35219 290 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 NBL1P41271 181 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 RAB27AP51159 221 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 NUBP1P53384 320 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 KCNB1Q14721 858 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 DCAF4L1Q3SXM0 396 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 GLB1LQ6UWU2 654 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 MPZL3Q6UWV2 235 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 ZPBP2Q6X784 338 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 TAS1R1Q7RTX1 841 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 GPR149Q86SP6 731 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 RNF168Q8IYW5 571 aaPredicted RBP9.87□□□□□ -0.83
VCP-206ENST00000480327 TDRD5Q8NAT2 981 aaKnown RBP9.87□□□□□ -0.83
VCP-206ENST00000480327 ZNF507Q8TCN5 953 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 POMGNT1Q8WZA1 660 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 PGBD4Q96DM1 585 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 GBP3Q9H0R5 595 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 PCIF1Q9H4Z3 704 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 TMEM206Q9H813 350 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 PTPRHQ9HD43 1115 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 SNTG2Q9NY99 539 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 MIA3Q5JRA6 1907 aa9.87□□□□□ -0.83
VCP-206ENST00000480327 PATJQ8NI35 1801 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 CACNA1AO00555 2505 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 GOLGA8IPA6NC78 632 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 GOLGA8JA6NMD2 632 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 NRP1O14786 923 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 CLIC2O15247 247 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 PIGRP01833 764 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 MCF2P10911 925 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 SCP2P22307 547 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 PROZP22891 400 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 ADSSP30520 456 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 TNFSF9P41273 254 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 MCL1Q07820 350 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 NOLC1Q14978 699 aaKnown RBP eCLIP9.86□□□□□ -0.83
VCP-206ENST00000480327 ATAT1Q5SQI0 421 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 ZBTB41Q5SVQ8 909 aa9.86□□□□□ -0.83
VCP-206ENST00000480327 ZNF658Q5TYW1 1059 aaPredicted RBP9.86□□□□□ -0.83
VCP-206ENST00000480327 ASTLQ6HA08 431 aaPredicted RBP9.86□□□□□ -0.83
VCP-206ENST00000480327 APBB1IPQ7Z5R6 666 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms