RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 OR1G1P47890 313 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 GCLMP48507 274 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 MCCD1P59942 119 aaPredicted RBP12.09□□□□□ -0.47
CLDN11-205ENST00000480067 DSC1Q08554 894 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 BIRC3Q13489 604 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 NAB2Q15742 525 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 RAB30Q15771 203 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
CLDN11-205ENST00000480067 ZNF516Q92618 1163 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 SLC35C1Q96A29 364 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 UROC1Q96N76 676 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 NRDE2Q9H7Z3 1164 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 AAASQ9NRG9 546 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 TUBGCP4Q9UGJ1 667 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 MRPL42Q9Y6G3 142 aaKnown RBP12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PTPRJQ12913 1337 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 LCHNA4D1U4 455 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
CLDN11-205ENST00000480067 CA3P07451 260 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 KRT19P08727 400 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 LAG3P18627 525 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PBX2P40425 430 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 CLCNKBP51801 687 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 BCAR1P56945 870 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 RBP5P82980 135 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 SOX4Q06945 474 aaPredicted RBP12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PPP3CAQ08209 521 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 CETN1Q12798 172 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 KCNH2Q12809 1159 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 TRPC3Q13507 836 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 C1orf220Q5T0J3 134 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 SV2AQ7L0J3 742 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 TRAPPC11Q7Z392 1133 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 C1orf127Q8N9H9 656 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 FAM84AQ96KN4 292 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 TMEM175Q9BSA9 504 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PBX4Q9BYU1 374 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 HSD3B7Q9H2F3 369 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 CWH43Q9H720 699 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 TMEM8AQ9HCN3 771 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 FAN1Q9Y2M0 1017 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
CLDN11-205ENST00000480067 LINC01553A4QN01 128 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 NRP1O14786 923 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 B4GALT3O60512 393 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 B3GAT3O94766 335 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
CLDN11-205ENST00000480067 C4BPAP04003 597 aaKnown RBP12.08□□□□□ -0.48
CLDN11-205ENST00000480067 ITGB3P05106 788 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 GALTP07902 379 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 ATP1A3P13637 1013 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 LRPAP1P30533 357 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 SMAD3P84022 425 aaKnown RBP12.08□□□□□ -0.48
CLDN11-205ENST00000480067 KRT31Q15323 416 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 UPP1Q16831 310 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 ZACNQ401N2 412 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 KRT39Q6A163 491 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 KCNT2Q6UVM3 1135 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 RABGGTAQ92696 567 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
CLDN11-205ENST00000480067 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 COLEC11Q9BWP8 271 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 SLC28A3Q9HAS3 691 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 CACNG4Q9UBN1 327 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 AGAP1Q9UPQ3 857 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 PRG3Q9Y2Y8 225 aaPredicted RBP12.08□□□□□ -0.48
CLDN11-205ENST00000480067 CHD7Q9P2D1 2997 aa12.08□□□□□ -0.48
CLDN11-205ENST00000480067 LRRC10BA6NIK2 292 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 NT5C1B-RDH14C9J2C7 533 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 PODXLO00592 558 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 N4BP1O75113 896 aaKnown RBP12.07□□□□□ -0.48
CLDN11-205ENST00000480067 TADA2AO75478 443 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 SERPINC1P01008 464 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 POLR2BP30876 1174 aaKnown RBP12.07□□□□□ -0.48
CLDN11-205ENST00000480067 PBX3P40426 434 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 SLC11A1P49279 550 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 MXI1P50539 228 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 NCOA4Q13772 614 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 TDRD10Q5VZ19 366 aaKnown RBP12.07□□□□□ -0.48
CLDN11-205ENST00000480067 C9orf57Q5W0N0 161 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 GAS2L3Q86XJ1 694 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 PAAF1Q9BRP4 392 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 VPS16Q9H269 839 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 NDST4Q9H3R1 872 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 TAB2Q9NYJ8 693 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 LIMA1Q9UHB6 759 aaKnown RBP12.07□□□□□ -0.48
CLDN11-205ENST00000480067 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
CLDN11-205ENST00000480067 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms