RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 SYNPOQ8N3V7 929 aa12.38□□□□□ -0.43
CCDC18-208ENST00000479653 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
CCDC18-208ENST00000479653 CYP4F11Q9HBI6 524 aa12.38□□□□□ -0.43
CCDC18-208ENST00000479653 RBM8AQ9Y5S9 174 aaKnown RBP12.38□□□□□ -0.43
CCDC18-208ENST00000479653 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 BCLAF3A2AJT9 711 aaKnown RBP12.37□□□□□ -0.43
CCDC18-208ENST00000479653 MYBPHLA2RUH7 354 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 DCLK1O15075 740 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 CHADO15335 359 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 PSMD10O75832 226 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 THP07101 528 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 ARF4P18085 180 aaPredicted RBP12.37□□□□□ -0.43
CCDC18-208ENST00000479653 GNA11P29992 359 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 GBP1P32455 592 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 CTHP32929 405 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 RFC5P40937 340 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 CCINQ13939 588 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 PKN3Q6P5Z2 889 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 SLC27A1Q6PCB7 646 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 ZNF461Q8TAF7 563 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
CCDC18-208ENST00000479653 BBC3Q96PG8 261 aaPredicted RBP12.37□□□□□ -0.43
CCDC18-208ENST00000479653 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 GTSE1Q9NYZ3 720 aa12.37□□□□□ -0.43
CCDC18-208ENST00000479653 SPAARA0A1B0GVQ0 90 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 CDX4O14627 284 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 B4GALT5O43286 388 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 ZBTB43O43298 467 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 ATG13O75143 517 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 B3GAT3O94766 335 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 FGFR3P22607 806 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 PTENP60484 403 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 SIM1P81133 766 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 TEAD2Q15562 447 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 PFKFB3Q16875 520 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 APOA5Q6Q788 366 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 ANKS3Q6ZW76 656 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 SGMS1Q86VZ5 419 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 CCDC12Q8WUD4 166 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 HNRNPLLQ8WVV9 542 aaKnown RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 ZFYVE19Q96K21 471 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 DHX33Q9H6R0 707 aaKnown RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 TRPV4Q9HBA0 871 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 POLR3BQ9NW08 1133 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-208ENST00000479653 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 GREB1Q4ZG55 1949 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 NCANO14594 1321 aa12.36□□□□□ -0.43
CCDC18-208ENST00000479653 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
CCDC18-208ENST00000479653 CHMLP26374 656 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 TKTP29401 623 aaKnown RBP12.35□□□□□ -0.43
CCDC18-208ENST00000479653 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
CCDC18-208ENST00000479653 USP11P51784 963 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 ROR1Q01973 937 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 TFDP1Q14186 410 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 EMC2Q15006 297 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 HAUS6Q7Z4H7 955 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 CHCHD4Q8N4Q1 142 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 ADAM32Q8TC27 787 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 LRIG1Q96JA1 1093 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 NAP1L2Q9ULW6 460 aaPredicted RBP12.35□□□□□ -0.43
CCDC18-208ENST00000479653 INSL5Q9Y5Q6 135 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 NOTCH4Q99466 2003 aa12.35□□□□□ -0.43
CCDC18-208ENST00000479653 ESYT2A0FGR8 921 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 GOLGA8AA7E2F4 631 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 I3L4J1 428 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 DPYSL4O14531 572 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 PTGESO14684 152 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 EDIL3O43854 480 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC18-208ENST00000479653 MOSPD3O75425 235 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 ABLIM3O94929 683 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 SEC24AO95486 1093 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 ATF2P15336 505 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 IRX4P78413 519 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 MBTD1Q05BQ5 628 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 FCHO2Q0JRZ9 810 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 MXD4Q14582 209 aaPredicted RBP12.34□□□□□ -0.43
CCDC18-208ENST00000479653 AMHR2Q16671 573 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 XKR9Q5GH70 373 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 BICD2Q8TD16 824 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 HHIPQ96QV1 700 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 TMEM209Q96SK2 561 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 MTRQ99707 1265 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 ASAH2Q9NR71 780 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 INVSQ9Y283 1065 aa12.34□□□□□ -0.43
CCDC18-208ENST00000479653 NAV2Q8IVL1 2488 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms