RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TMEM169Q96HH4 297 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 SCLT1Q96NL6 688 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 KLHL5Q96PQ7 755 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 ADPGKQ9BRR6 497 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 TMEM175Q9BSA9 504 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 APOL5Q9BWW9 433 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 PANK2Q9BZ23 570 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 GBP3Q9H0R5 595 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 KCTD10Q9H3F6 313 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 PDZD7Q9H5P4 517 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 MRPL44Q9H9J2 332 aaKnown RBP9.72□□□□□ -0.85
DDX56-211ENST00000479602 RXFP1Q9HBX9 757 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 CHST7Q9NS84 486 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 DZANK1Q9NVP4 752 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 MIOSQ9NXC5 875 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 KANSL3Q9P2N6 904 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 STK39Q9UEW8 545 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 SORCS3Q9UPU3 1222 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
DDX56-211ENST00000479602 PDCD11Q14690 1871 aaKnown RBP9.71□□□□□ -0.85
DDX56-211ENST00000479602 A0A0B4J269 797 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 NPHP3-ACAD11A0A0J9YXS1 232 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 CCDC169A6NNP5 214 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 NRP1O14786 923 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 SLC16A4O15374 487 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 LETM1O95202 739 aaPredicted RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 CAVIN2O95810 425 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 LDHAP00338 332 aaKnown RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 ALDH2P05091 517 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 EDN1P05305 212 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 CNPP09543 421 aaKnown RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 IDEP14735 1019 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 NPR3P17342 541 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 GRM5P41594 1212 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 AFMP43652 599 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 NOLC1Q14978 699 aaKnown RBP eCLIP9.71□□□□□ -0.86
DDX56-211ENST00000479602 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 ATF7IP2Q5U623 682 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 CENPPQ6IPU0 288 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 CES5AQ6NT32 575 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 HS2ST1Q7LGA3 356 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 TAS1R1Q7RTX1 841 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 CD302Q8IX05 232 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 GPR65Q8IYL9 337 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 ADSSL1Q8N142 457 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 MLKLQ8NB16 471 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 CMASQ8NFW8 434 aaPredicted RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 PGBD4Q96DM1 585 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 DHTKD1Q96HY7 919 aaPredicted RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 PLEKHA5Q9HAU0 1116 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 KIAA1586Q9HCI6 787 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 DMAC2Q9NW81 257 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 MARCH5Q9NX47 278 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 PIN4Q9Y237 131 aaKnown RBP9.71□□□□□ -0.86
DDX56-211ENST00000479602 GIT1Q9Y2X7 761 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 CITO14578 2027 aa9.71□□□□□ -0.86
DDX56-211ENST00000479602 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 OGTO15294 1046 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 CLDN3O15551 220 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 GALR2O43603 387 aaPredicted RBP9.7□□□□□ -0.86
DDX56-211ENST00000479602 N4BP1O75113 896 aaKnown RBP9.7□□□□□ -0.86
DDX56-211ENST00000479602 ZC3H11AO75152 810 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDX56-211ENST00000479602 GCNT3O95395 438 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 SOD2P04179 222 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 WEE2P0C1S8 567 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 KCNA4P22459 653 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 PAX3P23760 479 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 NMT1P30419 496 aaKnown RBP9.7□□□□□ -0.86
DDX56-211ENST00000479602 HOXD13P35453 343 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 CASP5P51878 434 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 PNOCQ13519 176 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 DHX8Q14562 1220 aaKnown RBP9.7□□□□□ -0.86
DDX56-211ENST00000479602 SLC39A4Q6P5W5 647 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 LILRA6Q6PI73 481 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 C15orf39Q6ZRI6 1047 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 PPFIBP1Q86W92 1011 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 SUGP1Q8IWZ8 645 aaKnown RBP9.7□□□□□ -0.86
DDX56-211ENST00000479602 GRAMD1CQ8IYS0 662 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 TMEM105Q8N8V8 129 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 CDT1Q9H211 546 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 SMOC2Q9H3U7 446 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 RSAD1Q9HA92 442 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 LIMD1Q9UGP4 676 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 DACH1Q9UI36 760 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 DERAQ9Y315 318 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 OTOGLQ3ZCN5 2332 aa9.7□□□□□ -0.86
DDX56-211ENST00000479602 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.69□□□□□ -0.86
DDX56-211ENST00000479602 BICDL2A1A5D9 508 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 PSMA7O14818 248 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 B4GALT5O43286 388 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 TGFB1I1O43294 461 aa9.69□□□□□ -0.86
DDX56-211ENST00000479602 CLTAP09496 248 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms