RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PTENP60484 403 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 LMNB2Q03252 620 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 PRKCQQ04759 706 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 MBTD1Q05BQ5 628 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 MTAPQ13126 283 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 NAB2Q15742 525 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 LPAL2Q16609 132 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 USP41Q3LFD5 358 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ELMSAN1Q6PJG2 1045 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 RSPO2Q6UXX9 243 aaPredicted RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 CLEC17AQ6ZS10 378 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 TPRG1Q6ZUI0 275 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 GAS2L3Q86XJ1 694 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ZBTB8OSQ8IWT0 167 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ASAP3Q8TDY4 903 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ATRIPQ8WXE1 791 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ING5Q8WYH8 240 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 CCDC51Q96ER9 411 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 SHDQ96IW2 340 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 PDLIM2Q96JY6 352 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 NACC1Q96RE7 527 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 RTKNQ9BST9 563 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 COLEC11Q9BWP8 271 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 CSRNP2Q9H175 543 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 FOXP1Q9H334 677 aaPredicted RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 TUFT1Q9NNX1 390 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 HEBP1Q9NRV9 189 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.33□□□□□ -1.24
VCP-205ENST00000479300 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 DNMT3BQ9UBC3 853 aaKnown RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 DPP7Q9UHL4 492 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 CDV3Q9UKY7 258 aaKnown RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 USP18Q9UMW8 372 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ZFP37Q9Y6Q3 630 aaPredicted RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 F5P12259 2224 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 CNOT1A5YKK6 2376 aaKnown RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 NCANO14594 1321 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 ARHGEF35A5YM69 484 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 C2orf72A6NCS6 295 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 FAM205CA6NFA0 338 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 LRRIQ4A6NIV6 560 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 PRR5-ARHGAP8B1AHC4 643 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 GOLGA6L22H0YM25 854 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 GPR37O15354 613 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 GDF9O60383 454 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 USO1O60763 962 aaKnown RBP7.32□□□□□ -1.24
VCP-205ENST00000479300 LYPLA2O95372 231 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 HNRNPA1P09651 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
VCP-205ENST00000479300 OR52Z1P0C646 297 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 RPS9P46781 194 aaKnown RBP7.32□□□□□ -1.24
VCP-205ENST00000479300 ZNF445P59923 1031 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 ARHGAP8P85298 464 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 SPIRE1Q08AE8 756 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 DMWDQ09019 674 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 SPEM2Q0P670 501 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 CAPSQ13938 189 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 GAS6Q14393 721 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 EARS2Q5JPH6 523 aaKnown RBP7.32□□□□□ -1.24
VCP-205ENST00000479300 PPM1JQ5JR12 505 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 WDR44Q5JSH3 913 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 TTC38Q5R3I4 469 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 ZBTB41Q5SVQ8 909 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 HAUS3Q68CZ6 603 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 TANGO2Q6ICL3 276 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 NOTUMQ6P988 496 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 CD300LGQ6UXG3 332 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 MTSS1LQ765P7 747 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 APBB1IPQ7Z5R6 666 aaPredicted RBP7.32□□□□□ -1.24
VCP-205ENST00000479300 MCPH1Q8NEM0 835 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 SLC7A14Q8TBB6 771 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 PIK3R5Q8WYR1 880 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 TNFRSF25Q93038 417 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 TMEM121BQ9BXQ6 578 aaPredicted RBP7.32□□□□□ -1.24
VCP-205ENST00000479300 C2orf40Q9H1Z8 148 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 ZKSCAN5Q9Y2L8 839 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 GIT1Q9Y2X7 761 aa7.32□□□□□ -1.24
VCP-205ENST00000479300 CASTOR2A6NHX0 329 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 H3BQV1 296 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 HAX1O00165 279 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 SLC30A4O14863 429 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 TBC1D4O60343 1298 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 NPTXRO95502 500 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 EDN1P05305 212 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 POU2F2P09086 479 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 CEBPBP17676 345 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 GLRA2P23416 452 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 HOXA9P31269 272 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 CCT6AP40227 531 aaKnown RBP7.31□□□□□ -1.24
VCP-205ENST00000479300 TRAPPC10P48553 1259 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 FOXK1P85037 733 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 POU5F1BQ06416 359 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 GRIK3Q13003 919 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 SRSF5Q13243 272 aaKnown RBP7.31□□□□□ -1.24
VCP-205ENST00000479300 PPP2R5AQ15172 486 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 RABEP1Q15276 862 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 ZNF174Q15697 407 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 PSMD5Q16401 504 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 KLHL40Q2TBA0 621 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 PPM1LQ5SGD2 360 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 FAM171A1Q5VUB5 890 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms