RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 PRSS36Q5K4E3 855 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ATF7IP2Q5U623 682 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 RTL10Q7L3V2 364 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 NSUN7Q8NE18 718 aaKnown RBP12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ELSPBP1Q96BH3 223 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 NACC1Q96RE7 527 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 NELL2Q99435 816 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 CORO1BQ9BR76 489 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-237ENST00000479169 CDV3Q9UKY7 258 aaKnown RBP12.11□□□□□ -0.47
HDLBP-237ENST00000479169 SPAG17Q6Q759 2223 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 SMIM28A0A1B0GU29 152 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 DCDC2BA2VCK2 349 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 NCAM2O15394 837 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 SEC24AO95486 1093 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 TDGF1P13385 188 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 PTPN2P17706 415 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 ELF1P32519 619 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 OSTNP61366 133 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 GUCY1B3Q02153 619 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 ECM1Q16610 540 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 FAM78AQ5JUQ0 283 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 SLC8B1Q6J4K2 584 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 SECISBP2LQ93073 1101 aaKnown RBP12.1□□□□□ -0.47
HDLBP-237ENST00000479169 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 BORCS6Q96GS4 357 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 UROC1Q96N76 676 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 POLR3CQ9BUI4 534 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-237ENST00000479169 CDT1Q9H211 546 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 CYP4F11Q9HBI6 524 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 MRPS17Q9Y2R5 130 aaKnown RBP12.1□□□□□ -0.47
HDLBP-237ENST00000479169 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 ANK1P16157 1881 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 CFAP47Q6ZTR5 3102 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 NCANO14594 1321 aa12.1□□□□□ -0.47
HDLBP-237ENST00000479169 PODXLO00592 558 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 TRAPPC3O43617 180 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 ABLIM3O94929 683 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 RPA1P27694 616 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 LMNB2Q03252 620 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 PPP2R5AQ15172 486 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 VITQ6UXI7 678 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 HS6ST3Q8IZP7 471 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 GPR161Q8N6U8 529 aaKnown RBP12.09□□□□□ -0.47
HDLBP-237ENST00000479169 ZNF461Q8TAF7 563 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 ZMAT2Q96NC0 199 aaKnown RBP12.09□□□□□ -0.47
HDLBP-237ENST00000479169 ASB16Q96NS5 453 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 CHRDQ9H2X0 955 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 ZFP14Q9HCL3 533 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 INSL5Q9Y5Q6 135 aa12.09□□□□□ -0.47
HDLBP-237ENST00000479169 TBC1D4O60343 1298 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 MOSPD3O75425 235 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 OR52Z1P0C646 297 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ATF2P15336 505 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 GJA1P17302 382 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 GDI1P31150 447 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 VIPR2P41587 438 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 GRM5P41594 1212 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 EFNA5P52803 228 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 TRIM29Q14134 588 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ANKRD1Q15327 319 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ZNF174Q15697 407 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ZNF568Q3ZCX4 644 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ALKAL1Q6UXT8 129 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 PDZD4Q76G19 769 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-237ENST00000479169 TCEAL8Q8IYN2 117 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 TMEM130Q8N3G9 435 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ERMNQ8TAM6 284 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 C18orf25Q96B23 403 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-237ENST00000479169 TRMT61BQ9BVS5 477 aaKnown RBP12.08□□□□□ -0.48
HDLBP-237ENST00000479169 CCDC94Q9BW85 323 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-237ENST00000479169 BHMT2Q9H2M3 363 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 ZNF334Q9HCZ1 680 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-237ENST00000479169 FBXL5Q9UKA1 691 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 GMEB2Q9UKD1 530 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
HDLBP-237ENST00000479169 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.08□□□□□ -0.48
HDLBP-237ENST00000479169 PRR5-ARHGAP8B1AHC4 643 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 K7ERI5 159 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 MAN2B1O00754 1011 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 ZNF197O14709 1029 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 MEFVO15553 781 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-237ENST00000479169 MYL4P12829 197 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 SDHBP21912 280 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 CCT6AP40227 531 aaKnown RBP12.07□□□□□ -0.48
HDLBP-237ENST00000479169 YARSP54577 528 aaKnown RBP12.07□□□□□ -0.48
HDLBP-237ENST00000479169 PEX3P56589 373 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 ARHGAP8P85298 464 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 SATB1Q01826 763 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 ST3GAL1Q11201 340 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 TWF1Q12792 350 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 MRPL58Q14197 206 aaKnown RBP12.07□□□□□ -0.48
HDLBP-237ENST00000479169 CTXN3Q4LDR2 81 aa12.07□□□□□ -0.48
HDLBP-237ENST00000479169 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms