RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 CD300LGQ6UXG3 332 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 MARCH9Q86YJ5 346 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 PNPLA1Q8N8W4 532 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 PRPF31Q8WWY3 499 aaKnown RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SLC32A1Q9H598 525 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 CEP72Q9P209 647 aa13.64□□□□□ -0.23
HDAC8-217ENST00000478743 MBD1Q9UIS9 605 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-217ENST00000478743 SH2B2O14492 632 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-217ENST00000478743 RNF40O75150 1001 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 NPTXRO95502 500 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 MYL4P12829 197 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 ENGP17813 658 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 TUSC3Q13454 348 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-217ENST00000478743 CCNI2Q6ZMN8 369 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-217ENST00000478743 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 OR2I1PQ8NGU4 316 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 NCOA7Q8NI08 942 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 CAMK1GQ96NX5 476 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 UBL7Q96S82 380 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-217ENST00000478743 TPSD1Q9BZJ3 242 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 INSL5Q9Y5Q6 135 aa13.63□□□□□ -0.23
HDAC8-217ENST00000478743 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
HDAC8-217ENST00000478743 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 MICAL2O94851 1124 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 EGFP01133 1207 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 ARF4P18085 180 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-217ENST00000478743 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-217ENST00000478743 TRIM61Q5EBN2 209 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 NOTUMQ6P988 496 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 ZNF605Q86T29 641 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 YAF2Q8IY57 180 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 SYNPOQ8N3V7 929 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 RNF149Q8NC42 400 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 PIGKQ92643 395 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 LNPKQ9C0E8 428 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 FBRSL1Q9HCM7 1045 aaKnown RBP13.62□□□□□ -0.23
HDAC8-217ENST00000478743 TMEM74BQ9NUR3 256 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 PARP2Q9UGN5 583 aa13.62□□□□□ -0.23
HDAC8-217ENST00000478743 PI4KAP42356 2102 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 ANTXRLA6NF34 631 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 H0Y626 953 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 PRRG1O14668 218 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 ZNF197O14709 1029 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 ERLIN2O94905 339 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 TRIM16O95361 564 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 U2AF2P26368 475 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC8-217ENST00000478743 BRCC3P46736 316 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 FUT2Q10981 343 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 C1orf228Q6PIY5 440 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 NFXL1Q6ZNB6 911 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 DAGLBQ8NCG7 672 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-217ENST00000478743 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 CYP4F11Q9HBI6 524 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 WRAP73Q9P2S5 460 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-217ENST00000478743 TRIP11Q15643 1979 aa13.61□□□□□ -0.23
HDAC8-217ENST00000478743 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
HDAC8-217ENST00000478743 HELZP42694 1942 aaKnown RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 OTOL1A6NHN0 477 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 J3QKU1 62 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 ATXN7O15265 892 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 PRC1O43663 620 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 GAS7O60861 476 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 ABLIM3O94929 683 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 DHPSP49366 369 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 JAK3P52333 1124 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 EPHA5P54756 1037 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 ARPP19P56211 112 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 KARSQ15046 597 aaKnown RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 TMEM196Q5HYL7 178 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 B3GNT9Q6UX72 402 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 RTL10Q7L3V2 364 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 CAMKK1Q8N5S9 505 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 PSPC1Q8WXF1 523 aaKnown RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 SLC5A5Q92911 643 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 TMEM209Q96SK2 561 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 EVLQ9UI08 416 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 BACE2Q9Y5Z0 518 aa13.6□□□□□ -0.23
HDAC8-217ENST00000478743 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-217ENST00000478743 A0A1W2PRU2 124 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 SFNP31947 248 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 CIITAP33076 1130 aa13.59□□□□□ -0.23
HDAC8-217ENST00000478743 DGKEP52429 567 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms