RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 IGFLR1Q9H665 355 aa29.06■■■□□ 2.24
CCM2-211ENST00000478582 MARCH5Q9NX47 278 aa29.06■■■□□ 2.24
CCM2-211ENST00000478582 UBQLN1Q9UMX0 589 aaKnown RBP29.06■■■□□ 2.24
CCM2-211ENST00000478582 TTC28Q96AY4 2481 aa29.06■■■□□ 2.24
CCM2-211ENST00000478582 TRIP11Q15643 1979 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 CASTOR2A6NHX0 329 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 TNFRSF10AO00220 468 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 BIN1O00499 593 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 XPOTO43592 962 aaKnown RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 NR3C1P04150 777 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 RPL9P32969 192 aaKnown RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 GTF2F1P35269 517 aaKnown RBP eCLIP29.05■■■□□ 2.241e-8■■■■■ 31.2
CCM2-211ENST00000478582 LTBRP36941 435 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 ADAM15Q13444 863 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 STIM1Q13586 685 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 SNRNP35Q16560 246 aaKnown RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 EDRF1Q3B7T1 1238 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 JADE1Q6IE81 842 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 DDX53Q86TM3 631 aaKnown RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 BCL7CQ8WUZ0 217 aaPredicted RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 C18orf25Q96B23 403 aaPredicted RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 DHTKD1Q96HY7 919 aaPredicted RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 PAAF1Q9BRP4 392 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 STK39Q9UEW8 545 aa29.05■■■□□ 2.24
CCM2-211ENST00000478582 PRG3Q9Y2Y8 225 aaPredicted RBP29.05■■■□□ 2.24
CCM2-211ENST00000478582 PPP1R3GB7ZBB8 358 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 H3BQ06 376 aaPredicted RBP29.04■■■□□ 2.24
CCM2-211ENST00000478582 FSCN2O14926 492 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 EXOC3O60645 756 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 EFEMP2O95967 443 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 SPAG1Q07617 926 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 SURF1Q15526 300 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 UPP1Q16831 310 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 PUS10Q3MIT2 529 aaKnown RBP29.04■■■□□ 2.24
CCM2-211ENST00000478582 NECAB3Q96P71 396 aaPredicted RBP29.04■■■□□ 2.24
CCM2-211ENST00000478582 PCDHGC5Q9Y5F6 944 aa29.04■■■□□ 2.24
CCM2-211ENST00000478582 TMEM189-UBE2V1I3L0A0 370 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 CD44P16070 742 aaKnown RBP29.03■■■□□ 2.24
CCM2-211ENST00000478582 LRPAP1P30533 357 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 WNT7BP56706 349 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 TMEM132DQ14C87 1099 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 SPATA1Q5VX52 437 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 DCLRE1AQ6PJP8 1040 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 RBM43Q6ZSC3 357 aaKnown RBP29.03■■■□□ 2.24
CCM2-211ENST00000478582 NOC3LQ8WTT2 800 aaKnown RBP29.03■■■□□ 2.24
CCM2-211ENST00000478582 MFSD14AQ96MC6 490 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 GOLGA2P5Q9HBQ8 144 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 CACNG4Q9UBN1 327 aa29.03■■■□□ 2.24
CCM2-211ENST00000478582 PDCD11Q14690 1871 aaKnown RBP29.03■■■□□ 2.24
CCM2-211ENST00000478582 PSMA7O14818 248 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 NFICP08651 508 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 PTMSP20962 102 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 CCNE1P24864 410 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 RPL13P26373 211 aaKnown RBP29.02■■■□□ 2.24
CCM2-211ENST00000478582 NRIP1P48552 1158 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 CLCNKBP51801 687 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 PTCRAQ6ISU1 281 aaPredicted RBP29.02■■■□□ 2.24
CCM2-211ENST00000478582 FOXR2Q6PJQ5 311 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 RBM23Q86U06 439 aaKnown RBP29.02■■■□□ 2.24
CCM2-211ENST00000478582 EFHBQ8N7U6 833 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 RDH13Q8NBN7 331 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 BEST2Q8NFU1 509 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 TLE6Q9H808 572 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 TUBGCP4Q9UGJ1 667 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 ADAM28Q9UKQ2 775 aa29.02■■■□□ 2.24
CCM2-211ENST00000478582 MAPK13O15264 365 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 NR2F2P24468 414 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 LRRC63Q05C16 580 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 CYP24A1Q07973 514 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 PSMD6Q15008 389 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 EFCAB13Q8IY85 973 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 RNF168Q8IYW5 571 aaPredicted RBP29.01■■■□□ 2.23
CCM2-211ENST00000478582 RABGGTAQ92696 567 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 TSG101Q99816 390 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 VN1R3Q9BXE9 311 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 PDE11AQ9HCR9 933 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 NGRNQ9NPE2 291 aaKnown RBP29.01■■■□□ 2.23
CCM2-211ENST00000478582 ANK1P16157 1881 aa29.01■■■□□ 2.23
CCM2-211ENST00000478582 GRXCR2A6NFK2 248 aa29■■■□□ 2.23
CCM2-211ENST00000478582 F8W810 466 aa29■■■□□ 2.23
CCM2-211ENST00000478582 LINC01565O15544 149 aa29■■■□□ 2.23
CCM2-211ENST00000478582 KIF4AO95239 1232 aa29■■■□□ 2.23
CCM2-211ENST00000478582 DLX2Q07687 328 aaPredicted RBP29■■■□□ 2.23
CCM2-211ENST00000478582 ADAM9Q13443 819 aa29■■■□□ 2.23
CCM2-211ENST00000478582 CD300LGQ6UXG3 332 aa29■■■□□ 2.23
CCM2-211ENST00000478582 TCF25Q9BQ70 676 aa29■■■□□ 2.23
CCM2-211ENST00000478582 PODXLO00592 558 aa28.99■■■□□ 2.23
CCM2-211ENST00000478582 TADA2AO75478 443 aa28.99■■■□□ 2.23
CCM2-211ENST00000478582 PMS1P54277 932 aaKnown RBP28.99■■■□□ 2.23
CCM2-211ENST00000478582 ANKRD40Q6AI12 368 aa28.99■■■□□ 2.23
CCM2-211ENST00000478582 ZC3H3Q8IXZ2 948 aaKnown RBP28.99■■■□□ 2.23
CCM2-211ENST00000478582 CACTINQ8WUQ7 758 aaKnown RBP28.99■■■□□ 2.23
CCM2-211ENST00000478582 ENTPD7Q9NQZ7 604 aa28.99■■■□□ 2.23
CCM2-211ENST00000478582 FRMD4BQ9Y2L6 1034 aa28.99■■■□□ 2.23
CCM2-211ENST00000478582 NCOR1O75376 2440 aa28.99■■■□□ 2.23
CCM2-211ENST00000478582 TBX10O75333 385 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 B3GAT3O94766 335 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 IL9P15248 144 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 CASP4P49662 377 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 CCDC183Q5T5S1 534 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms