RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 KCND2Q9NZV8 630 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 STK39Q9UEW8 545 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 TUBGCP4Q9UGJ1 667 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 ODF2LQ9ULJ1 636 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 SRPRBQ9Y5M8 271 aaKnown RBP9.06□□□□□ -0.96
ERCC8-205ENST00000477893 IRAK3Q9Y616 596 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 ZMYM2Q9UBW7 1377 aa9.06□□□□□ -0.96
ERCC8-205ENST00000477893 SMIM28A0A1B0GU29 152 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 FAM187AA6NFU0 413 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 C2CD4DB7Z1M9 353 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 LOC730098B7Z3J9 87 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 TISP43B9A030 160 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 PODXLO00592 558 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 ABLIM1O14639 778 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 CLDN3O15551 220 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 MEFVO15553 781 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-205ENST00000477893 SLC26A4O43511 780 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 TRAK2O60296 914 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 LILRB3O75022 631 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 TOM1L1O75674 476 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 RFPL2O75678 378 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 B3GAT3O94766 335 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 ALADP13716 330 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 PROZP22891 400 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 TNFSF9P41273 254 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 BRCC3P46736 316 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 PKP1Q13835 747 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 SLC39A14Q15043 492 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 PSMD5Q16401 504 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 ZC2HC1CQ53FD0 456 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-205ENST00000477893 SFR1Q86XK3 245 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 RNF168Q8IYW5 571 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-205ENST00000477893 C3orf58Q8NDZ4 430 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 NOC3LQ8WTT2 800 aaKnown RBP9.05□□□□□ -0.96
ERCC8-205ENST00000477893 STAMQ92783 540 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 RIPOR3Q96MK2 946 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 ZMAT2Q96NC0 199 aaKnown RBP9.05□□□□□ -0.96
ERCC8-205ENST00000477893 TTPALQ9BTX7 342 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 MSTO1Q9BUK6 570 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 CCSER1Q9C0I3 900 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 HAPLN2Q9GZV7 340 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 IKZF4Q9H2S9 585 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 ZSCAN16Q9H4T2 348 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-205ENST00000477893 PTPRHQ9HD43 1115 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 TBX20Q9UMR3 447 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 SSX2IPQ9Y2D8 614 aa9.05□□□□□ -0.96
ERCC8-205ENST00000477893 A0A087X0B3 334 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 MYMKA6NI61 221 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 H0YCG3 227 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 SPTLC2O15270 562 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ADAM12O43184 909 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 TGM5O43548 720 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 EFEMP2O95967 443 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ASGR2P07307 311 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ZSCAN22P10073 491 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-205ENST00000477893 IDEP14735 1019 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 TKTP29401 623 aaKnown RBP9.04□□□□□ -0.96
ERCC8-205ENST00000477893 DDIT3P35638 169 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 MTHFRP42898 656 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 NASPP49321 788 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-205ENST00000477893 GUCY2FP51841 1108 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ARPP19P56211 112 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ITIH3Q06033 890 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ATAT1Q5SQI0 421 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 CCDC73Q6ZRK6 1079 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 SV2BQ7L1I2 683 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 TDRD5Q8NAT2 981 aaKnown RBP9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ST13P5Q8NFI4 369 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-205ENST00000477893 ZNF396Q96N95 335 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-205ENST00000477893 NECTIN4Q96NY8 510 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 SMOC2Q9H3U7 446 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 CHST7Q9NS84 486 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 STK17AQ9UEE5 414 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 NR2E1Q9Y466 385 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 NUB1Q9Y5A7 615 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 PLXNA3P51805 1871 aa9.04□□□□□ -0.96
ERCC8-205ENST00000477893 MYH11P35749 1972 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 CCDC195A0A1B0GUA6 201 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 ANKRD63C9JTQ0 380 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 ST8SIA5O15466 376 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 F13A1P00488 732 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 MCM4P33991 863 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 ZNF131P52739 623 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 CREMQ03060 361 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 PPP2R3AQ06190 1150 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 MCL1Q07820 350 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 UPP1Q16831 310 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 SLC10A6Q3KNW5 377 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 HERC4Q5GLZ8 1057 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 LIN9Q5TKA1 542 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 SLC39A4Q6P5W5 647 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 ELMSAN1Q6PJG2 1045 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 DCLRE1AQ6PJP8 1040 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 ZPBP2Q6X784 338 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 CCDC149Q6ZUS6 474 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 NUDT18Q6ZVK8 323 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 GPR149Q86SP6 731 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms