RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ALDH1A3P47895 512 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 FXR1P51114 621 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 ATP2B3Q16720 1220 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 ATXN7L2Q5T6C5 722 aaPredicted RBP5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 KSR2Q6VAB6 950 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 GADL1Q6ZQY3 521 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 RGMAQ96B86 450 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 TMX3Q96JJ7 454 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 LDAHQ9H6V9 325 aa5.84□□□□□ -1.47
SMNDC1-205ENST00000477763 PNPLA7Q6ZV29 1317 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 CCDC194A0A1B0GVG4 234 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 TUSC2O75896 110 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 UBXN7O94888 489 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 ALDH2P05091 517 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 RAP2AP10114 183 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 TACR2P21452 398 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 FPR1P21462 350 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 HTR1BP28222 390 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 SMARCA1P28370 1054 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 CTXN1P60606 82 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 TUBA3CQ13748 450 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 TUBA3EQ6PEY2 450 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 CHST15Q7LFX5 561 aaPredicted RBP5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 DAAM2Q86T65 1068 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 PLXDC1Q8IUK5 500 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 SYT12Q8IV01 421 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 ZGPATQ8N5A5 531 aaKnown RBP5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 FBXO18Q8NFZ0 1043 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 STON2Q8WXE9 905 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 TIFAQ96CG3 184 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM167AQ96KS9 214 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 CGRRF1Q99675 332 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 TMEM60Q9H2L4 133 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 ARNT2Q9HBZ2 717 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 POGKQ9P215 609 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 DDX20Q9UHI6 824 aaKnown RBP5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 EIF2B4Q9UI10 523 aaKnown RBP5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 SORCS3Q9UPU3 1222 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 STXBP5LQ9Y2K9 1186 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 ACTL7AQ9Y615 435 aa5.83□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM227AF5H4B4 570 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 B3GALT2O43825 422 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 PPFIA4O75335 1185 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 POMCP01189 267 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 MYBP10242 640 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 APOBEC3AP31941 199 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 MAP2K6P52564 334 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 HK3P52790 923 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 SLC25A3Q00325 362 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 PURAQ00577 322 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 TARDBPQ13148 414 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 LSM12Q3MHD2 195 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 KHDC1Q4VXA5 237 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 DACT2Q5SW24 774 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 PPP1R35Q8TAP8 253 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 KLHDC4Q8TBB5 520 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 IFI44Q8TCB0 444 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 MTFMTQ96DP5 389 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 SLC46A2Q9BY10 475 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 SLC23A1Q9UHI7 598 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 CHST2Q9Y4C5 530 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 NR2E3Q9Y5X4 410 aa5.82□□□□□ -1.48
SMNDC1-205ENST00000477763 GAGE12BA1L429 117 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 GAGE12HA6NDE8 117 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 DRGXA6NNA5 263 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 LEFTY2O00292 366 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 SCAF4O95104 1147 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 HRGP04196 525 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 ALAS1P13196 640 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 C6P13671 934 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 TRIM27P14373 513 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 DGCR2P98153 550 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 ZXDAP98168 799 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 NHLH2Q02577 135 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 CREMQ03060 361 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 NOGQ13253 232 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 LLGL1Q15334 1064 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 MAP9Q49MG5 647 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 ANO6Q4KMQ2 910 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM102AQ5T9C2 384 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 OVCH2Q7RTZ1 564 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 GDF7Q7Z4P5 450 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM43AQ8N2R8 423 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 RNF169Q8NCN4 708 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 CPT1CQ8TCG5 803 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 SLC25A43Q8WUT9 341 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 RAB24Q969Q5 203 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 MRGPRX4Q96LA9 322 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 DMRTA2Q96SC8 542 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 VRK1Q99986 396 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 SARGQ9BW04 601 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 ZNF341Q9BYN7 854 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 LMBRD1Q9NUN5 540 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 PCDHA3Q9Y5H8 950 aa5.81□□□□□ -1.48
SMNDC1-205ENST00000477763 AHRRA9YTQ3 701 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 H3BUI4 141 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 FAM20BO75063 409 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 FZD7O75084 574 aa5.8□□□□□ -1.48
SMNDC1-205ENST00000477763 ZBED1O96006 694 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms