RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 PI4K2AQ9BTU6 479 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 HTATIP2Q9BUP3 242 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 LSM14BQ9BX40 385 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 INTS2Q9H0H0 1204 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 GANQ9H2C0 597 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 ASB7Q9H672 318 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 RSAD1Q9HA92 442 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 PLEKHA5Q9HAU0 1116 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 GOLGA2P5Q9HBQ8 144 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 APOBEC3GQ9HC16 384 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 GIT1Q9Y2X7 761 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 COQ4Q9Y3A0 265 aa10.04□□□□□ -0.8
PGK1-204ENST00000477335 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
PGK1-204ENST00000477335 PTPRSQ13332 1948 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 A0A1W2PQC6 194 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 CBFA2T2O43439 604 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 POMCP01189 267 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 CDC25BP30305 580 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 YARSP54577 528 aaKnown RBP10.03□□□□□ -0.8
PGK1-204ENST00000477335 MYL6P60660 151 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 WDR5P61964 334 aaKnown RBP10.03□□□□□ -0.8
PGK1-204ENST00000477335 FPGSQ05932 587 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 TBX2Q13207 712 aaPredicted RBP10.03□□□□□ -0.8
PGK1-204ENST00000477335 TMEM132DQ14C87 1099 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 FILIP1LQ4L180 1135 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 SPOPLQ6IQ16 392 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 ZNF365Q70YC5 407 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 OTOP2Q7RTS6 562 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 TMC6Q7Z403 805 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 RABGGTAQ92696 567 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 DPF3Q92784 378 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 KAT5Q92993 513 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 CASD1Q96PB1 797 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.03□□□□□ -0.81e-12■■■■■ 32.4
PGK1-204ENST00000477335 TTYH3Q9C0H2 523 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 XYLT2Q9H1B5 865 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 ELAC1Q9H777 363 aaKnown RBP10.03□□□□□ -0.8
PGK1-204ENST00000477335 TMEM161AQ9NX61 479 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 CXXC1Q9P0U4 656 aaPredicted RBP10.03□□□□□ -0.8
PGK1-204ENST00000477335 GCNT4Q9P109 453 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 INPP5FQ9Y2H2 1132 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 DERAQ9Y315 318 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 C2CD2Q9Y426 696 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 TRIP11Q15643 1979 aa10.03□□□□□ -0.8
PGK1-204ENST00000477335 CITO14578 2027 aa10.02□□□□□ -0.8
PGK1-204ENST00000477335 TTC3P53804 2025 aa10.02□□□□□ -0.8
PGK1-204ENST00000477335 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 ANO9A1A5B4 782 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 GTPBP10A4D1E9 387 aaKnown RBP10.02□□□□□ -0.81
PGK1-204ENST00000477335 F8W810 466 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 SPTLC1O15269 473 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 P4HA2O15460 535 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 DDHD2O94830 711 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 EOMESO95936 686 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 GYPCP04921 128 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 ITGB3P05106 788 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 SKIP12755 728 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 POLR2BP30876 1174 aaKnown RBP10.02□□□□□ -0.81
PGK1-204ENST00000477335 PIK3CAP42336 1068 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 LRMPQ12912 555 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 PPIGQ13427 754 aaKnown RBP eCLIP10.02□□□□□ -0.812e-6■□□□□ 10
PGK1-204ENST00000477335 NCOA4Q13772 614 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 IKBKEQ14164 716 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 SURF1Q15526 300 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 EXOC3L4Q17RC7 722 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 DUOXA2Q1HG44 320 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 FKBP15Q5T1M5 1219 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 KRT39Q6A163 491 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 TRIM65Q6PJ69 517 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 CD300LGQ6UXG3 332 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 GBP6Q6ZN66 633 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 NPAS4Q8IUM7 802 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 CD302Q8IX05 232 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 SPC24Q8NBT2 197 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 EHBP1Q8NDI1 1231 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 TATDN2Q93075 761 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 PGBD4Q96DM1 585 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 PAAF1Q9BRP4 392 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 RC3H2Q9HBD1 1191 aaKnown RBP10.02□□□□□ -0.81
PGK1-204ENST00000477335 FAM207AQ9NSI2 230 aaPredicted RBP10.02□□□□□ -0.81
PGK1-204ENST00000477335 DPP3Q9NY33 737 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 PRKAG2Q9UGJ0 569 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 METRNQ9UJH8 293 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
PGK1-204ENST00000477335 ITIH6Q6UXX5 1313 aa10.02□□□□□ -0.81
PGK1-204ENST00000477335 STX10O60499 249 aa10.01□□□□□ -0.81
PGK1-204ENST00000477335 N4BP1O75113 896 aaKnown RBP10.01□□□□□ -0.81
PGK1-204ENST00000477335 UPP2O95045 317 aa10.01□□□□□ -0.81
PGK1-204ENST00000477335 TNNC2P02585 160 aa10.01□□□□□ -0.81
PGK1-204ENST00000477335 TPM2P07951 284 aa10.01□□□□□ -0.81
PGK1-204ENST00000477335 PFKMP08237 780 aa10.01□□□□□ -0.81
PGK1-204ENST00000477335 TMEM191BP0C7N4 346 aa10.01□□□□□ -0.81
PGK1-204ENST00000477335 PNMA6AP0CW24 399 aaPredicted RBP10.01□□□□□ -0.81
PGK1-204ENST00000477335 FXR1P51114 621 aaKnown RBP eCLIP10.01□□□□□ -0.816e-13■■□□□ 13.9
PGK1-204ENST00000477335 BIRC3Q13489 604 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms