RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 FKBP3Q00688 224 aaKnown RBP17.2■□□□□ 0.34
COPS3-207ENST00000477299 GPM6BQ13491 265 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 UPP1Q16831 310 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 FAM186BQ8IYM0 893 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 CXorf38Q8TB03 319 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 SYAP1Q96A49 352 aaPredicted RBP17.2■□□□□ 0.34
COPS3-207ENST00000477299 IGSF21Q96ID5 467 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 B3GALT6Q96L58 329 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 TMEM175Q9BSA9 504 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 MTMR12Q9C0I1 747 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 DPP3Q9NY33 737 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 PCDHB12Q9Y5F1 795 aa17.2■□□□□ 0.34
COPS3-207ENST00000477299 RPL13P26373 211 aaKnown RBP17.19■□□□□ 0.34
COPS3-207ENST00000477299 PSMC2P35998 433 aaKnown RBP17.19■□□□□ 0.34
COPS3-207ENST00000477299 PPP1R2P41236 205 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 POU5F1Q01860 360 aaKnown RBP17.19■□□□□ 0.34
COPS3-207ENST00000477299 ADGRE1Q14246 886 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
COPS3-207ENST00000477299 STX1AQ16623 288 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 ZNF697Q5TEC3 545 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 CD302Q8IX05 232 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 CSGALNACT2Q8N6G5 542 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 GPR62Q9BZJ7 368 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 INTS13Q9NVM9 706 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 SPG21Q9NZD8 308 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 UBQLN1Q9UMX0 589 aaKnown RBP17.19■□□□□ 0.34
COPS3-207ENST00000477299 FRMD4BQ9Y2L6 1034 aa17.19■□□□□ 0.34
COPS3-207ENST00000477299 PRRC2BQ5JSZ5 2229 aaKnown RBP17.19■□□□□ 0.34
COPS3-207ENST00000477299 BICDL2A1A5D9 508 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 H3BNC9 293 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 PODXLO00592 558 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 SPTLC1O15269 473 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 LRRN2O75325 713 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 CST3P01034 146 aaPredicted RBP17.18■□□□□ 0.34
COPS3-207ENST00000477299 TNNI1P19237 187 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 ERVFC1P60507 584 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 PPP3CAQ08209 521 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 C9orf57Q5W0N0 161 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 AAASQ9NRG9 546 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 SAMSN1Q9NSI8 373 aaKnown RBP17.18■□□□□ 0.34
COPS3-207ENST00000477299 SLC38A7Q9NVC3 462 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 ANO10Q9NW15 660 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 SIX4Q9UIU6 781 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 DERAQ9Y315 318 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 C2CD2Q9Y426 696 aa17.18■□□□□ 0.34
COPS3-207ENST00000477299 ANO9A1A5B4 782 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 PIRO00625 290 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 EFEMP2O95967 443 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 RB1P06400 928 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 CYP3A5P20815 502 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 ERCC5P28715 1186 aaPredicted RBP17.17■□□□□ 0.34
COPS3-207ENST00000477299 LRPAP1P30533 357 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 IRS1P35568 1242 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 VAMP7P51809 220 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 FILIP1Q7Z7B0 1213 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 BEST2Q8NFU1 509 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 POF1BQ8WVV4 589 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 GUCD1Q96NT3 240 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 PLVAPQ9BX97 442 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 MMRN2Q9H8L6 949 aa17.17■□□□□ 0.34
COPS3-207ENST00000477299 MAPK13O15264 365 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 TADA2AO75478 443 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 B3GAT3O94766 335 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 C4BPAP04003 597 aaKnown RBP17.16■□□□□ 0.34
COPS3-207ENST00000477299 ITGB3P05106 788 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 POLR2BP30876 1174 aaKnown RBP17.16■□□□□ 0.34
COPS3-207ENST00000477299 GCLMP48507 274 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 MCCD1P59942 119 aaPredicted RBP17.16■□□□□ 0.34
COPS3-207ENST00000477299 CLDN10P78369 228 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 BFSP1Q12934 665 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 TDRD10Q5VZ19 366 aaKnown RBP17.16■□□□□ 0.34
COPS3-207ENST00000477299 TRAPPC11Q7Z392 1133 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 WDR49Q8IV35 697 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 DEFB123Q8N688 67 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 TMC2Q8TDI7 906 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 MYLIPQ8WY64 445 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 RSPH1Q8WYR4 309 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 CEP63Q96MT8 703 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 SAMD11Q96NU1 681 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 FNBP1Q96RU3 617 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 AGAP1Q9UPQ3 857 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 RWDD3Q9Y3V2 267 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 TRANK1O15050 2925 aa17.16■□□□□ 0.34
COPS3-207ENST00000477299 TMEM265A0A087WTH1 108 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 VNN1O95497 513 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 EPB41P11171 864 aaKnown RBP17.15■□□□□ 0.34
COPS3-207ENST00000477299 RPL9P32969 192 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms