RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 IER5Q5VY09 327 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 GSG1L2A8MUP6 293 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 CENPAP49450 140 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 RAD23BP54727 409 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 RBP5P82980 135 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 ACTN3Q08043 901 aaPredicted RBP19.54■□□□□ 0.72
VARS2-209ENST00000477288 SNX17Q15036 470 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 ATPAF2Q8N5M1 289 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 ELMO2Q96JJ3 720 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 GJD4Q96KN9 370 aaPredicted RBP19.54■□□□□ 0.72
VARS2-209ENST00000477288 AGPAT1Q99943 283 aa19.54■□□□□ 0.72
VARS2-209ENST00000477288 MGAT5BQ3V5L5 792 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 RARS2Q5T160 578 aaKnown RBP19.53■□□□□ 0.72
VARS2-209ENST00000477288 SMARCAD1Q9H4L7 1026 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 RPS6KA5O75582 802 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 IMPDH2P12268 514 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 ARHGEF7Q14155 803 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 FAM180AQ6UWF9 173 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 C6orf203Q9P0P8 240 aaPredicted RBP19.53■□□□□ 0.72
VARS2-209ENST00000477288 WBP4O75554 376 aaKnown RBP19.53■□□□□ 0.72
VARS2-209ENST00000477288 WDR47O94967 919 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 C3orf70A6NLC5 250 aaPredicted RBP19.53■□□□□ 0.72
VARS2-209ENST00000477288 ENO1P06733 434 aaKnown RBP19.53■□□□□ 0.72
VARS2-209ENST00000477288 DEPDC1Q5TB30 811 aa19.53■□□□□ 0.72
VARS2-209ENST00000477288 PABPC5Q96DU9 382 aaKnown RBP19.53■□□□□ 0.72
VARS2-209ENST00000477288 CCDC159P0C7I6 412 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 MMS22LQ6ZRQ5 1243 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 SMIM5Q71RC9 77 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 ZFP42Q96MM3 310 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 CCDC22O60826 627 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 ITGA4P13612 1032 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 BTNL9Q6UXG8 535 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 NLRP14Q86W24 1093 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 TEX9Q8N6V9 391 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 ZNF555Q8NEP9 628 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 NEDD1Q8NHV4 660 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 CDC42EP1Q00587 391 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.72
VARS2-209ENST00000477288 C6orf10Q5SRN2 563 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 SCFD1Q8WVM8 642 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 C18orf8Q96DM3 657 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 HSPBP1Q9NZL4 362 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 APOA1P02647 267 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 KDSRQ06136 332 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 TRIM60Q495X7 471 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 C11orf74Q86VG3 221 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 SLC24A3Q9HC58 644 aa19.52■□□□□ 0.72
VARS2-209ENST00000477288 FAM32AQ9Y421 112 aaKnown RBP19.52■□□□□ 0.72
VARS2-209ENST00000477288 WDR19Q8NEZ3 1342 aa19.52■□□□□ 0.71
VARS2-209ENST00000477288 SCP2P22307 547 aa19.52■□□□□ 0.71
VARS2-209ENST00000477288 TRPC1P48995 793 aa19.52■□□□□ 0.71
VARS2-209ENST00000477288 SNX31Q8N9S9 440 aa19.52■□□□□ 0.71
VARS2-209ENST00000477288 TMA16Q96EY4 203 aaKnown RBP19.52■□□□□ 0.71
VARS2-209ENST00000477288 LZTS1Q9Y250 596 aa19.52■□□□□ 0.71
VARS2-209ENST00000477288 SDE2Q6IQ49 451 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 STKLD1Q8NE28 680 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 CPA5Q8WXQ8 436 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 TEX13BQ9BXU2 312 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 OR1G1P47890 313 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 RCAN1P53805 252 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 PCSK7Q16549 785 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 ZNF280CQ8ND82 737 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 ORC4O43929 436 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 ADCY3O60266 1144 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 GUF1Q8N442 669 aaKnown RBP19.51■□□□□ 0.71
VARS2-209ENST00000477288 TAF1DQ9H5J8 278 aaPredicted RBP19.51■□□□□ 0.71
VARS2-209ENST00000477288 PALMDQ9NP74 551 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 GGT7Q9UJ14 662 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 E2F8A0AVK6 867 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 GRID2IPA4D2P6 1211 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 XKR3Q5GH77 459 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 FRMD5Q7Z6J6 570 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 USP31Q70CQ4 1352 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 PNPLA6Q8IY17 1366 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 ANO9A1A5B4 782 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 DAB1O75553 588 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 SCARF1Q14162 830 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 INPP5AQ14642 412 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 PRAMEF18Q5VWM3 479 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 CACNA2D2Q9NY47 1150 aa19.51■□□□□ 0.71
VARS2-209ENST00000477288 H0Y626 953 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 TRIM16O95361 564 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 ANGEL2Q5VTE6 544 aaKnown RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 ADCK1Q86TW2 530 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 SLC30A5Q8TAD4 765 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 RFFLQ8WZ73 363 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 TARSL2A2RTX5 802 aaKnown RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 PRR23D1E9PI22 279 aaPredicted RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 CHUKO15111 745 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 RTN2O75298 545 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 PRR23D2P0DMB1 279 aaPredicted RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 ATXN3P54252 364 aaPredicted RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 MRPS15P82914 257 aaKnown RBP19.5■□□□□ 0.71
VARS2-209ENST00000477288 HIC1Q14526 733 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 SARM1Q6SZW1 724 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 INPP5DQ92835 1189 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 ATP11BQ9Y2G3 1177 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 PKP3Q9Y446 797 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 SLC30A1Q9Y6M5 507 aa19.5■□□□□ 0.71
VARS2-209ENST00000477288 NDUFS3O75489 264 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms