RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PCDHB2Q9Y5E7 798 aa8.08□□□□□ -1.12
BRCA1-214ENST00000477152 KMT2EQ8IZD2 1858 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 EREGO14944 169 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 C1RP00736 705 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 GALTP07902 379 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 ITGA4P13612 1032 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 TNP2Q05952 138 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 EPHA7Q15375 998 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 UGCGQ16739 394 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCA1-214ENST00000477152 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 XKR5Q6UX68 686 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 C15orf39Q6ZRI6 1047 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 C4orf19Q8IY42 314 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 VN1R2Q8NFZ6 395 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 GTPBP3Q969Y2 492 aaKnown RBP8.07□□□□□ -1.12
BRCA1-214ENST00000477152 ZNF668Q96K58 619 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-214ENST00000477152 GBP3Q9H0R5 595 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 NRDE2Q9H7Z3 1164 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 PDRG1Q9NUG6 133 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 TBC1D13Q9NVG8 400 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 ZFATQ9P243 1243 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 IGSF9Q9P2J2 1179 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 PCDHGC4Q9Y5F7 938 aa8.07□□□□□ -1.12
BRCA1-214ENST00000477152 TECTAO75443 2155 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 STK36Q9NRP7 1315 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 NT5C1B-RDH14C9J2C7 533 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 CCNT1O60563 726 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 CPNE3O75131 537 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 OFD1O75665 1012 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 TDP2O95551 362 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 SRGAP2CP0DJJ0 459 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 CD33P20138 364 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 FGFR4P22455 802 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 CLCN5P51795 746 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 DAB2P98082 770 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 POU5F1BQ06416 359 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 TRIM29Q14134 588 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 INF2Q27J81 1249 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 XKR9Q5GH70 373 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 NOTUMQ6P988 496 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 MRPL10Q7Z7H8 261 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 PRSS33Q8NF86 280 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 ETNPPLQ8TBG4 499 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 HDAC7Q8WUI4 952 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 CCDC74AQ96AQ1 378 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 ASIC4Q96FT7 647 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 RTP3Q9BQQ7 232 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 COLEC11Q9BWP8 271 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 GSX2Q9BZM3 304 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 POMKQ9H5K3 350 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 NCOA5Q9HCD5 579 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 ZNF318Q5VUA4 2279 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 PHACTR2O75167 634 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 RPLP1P05386 114 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 EPB42P16452 691 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 YWHABP31946 246 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 PBX3P40426 434 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 PSMD2Q13200 908 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 APBB1IPQ7Z5R6 666 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 GPR149Q86SP6 731 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 GPR65Q8IYL9 337 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 ZNF837Q96EG3 531 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 SLC30A3Q99726 388 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 FBXL21Q9UKT6 434 aa8.06□□□□□ -1.12
BRCA1-214ENST00000477152 TDRD15B5MCY1 1934 aaKnown RBP8.06□□□□□ -1.12
BRCA1-214ENST00000477152 ZMYM2Q9UBW7 1377 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 C2CD4DB7Z1M9 353 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 SOD2P04179 222 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 SP100P23497 879 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-214ENST00000477152 KRT2P35908 639 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 RBM10P98175 930 aaKnown RBP8.05□□□□□ -1.12
BRCA1-214ENST00000477152 LAMTOR4Q0VGL1 99 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 STK3Q13188 491 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 TDGQ13569 410 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 ALG1LQ6GMV1 187 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 NCAPH2Q6IBW4 605 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 B3GNT9Q6UX72 402 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 ANO5Q75V66 913 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 RNF149Q8NC42 400 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 CMASQ8NFW8 434 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-214ENST00000477152 SNX29Q8TEQ0 813 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 SLC22A17Q8WUG5 538 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 PRPF31Q8WWY3 499 aaKnown RBP8.05□□□□□ -1.12
BRCA1-214ENST00000477152 LPPQ93052 612 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 KLHL5Q96PQ7 755 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 PHF20Q9BVI0 1012 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 HERC2P3Q9BVR0 1158 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 RHOBTB2Q9BYZ6 727 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
BRCA1-214ENST00000477152 PIDD1Q9HB75 910 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 NPHS2Q9NP85 383 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 ANKEF1Q9NU02 776 aa8.05□□□□□ -1.12
BRCA1-214ENST00000477152 ABI2Q9NYB9 513 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-214ENST00000477152 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms