RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PCDHB12Q9Y5F1 795 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 PLXNA4Q9HCM2 1894 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 SCN1AP35498 2009 aa19.15■□□□□ 0.66
SREBF1-211ENST00000476994 TTC26A0AVF1 554 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 BECN2A8MW95 431 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 RECQL4O94761 1208 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 FGFR1OPO95684 399 aaKnown RBP19.14■□□□□ 0.65
SREBF1-211ENST00000476994 LINC00271P0C7V0 271 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 CXCL8P10145 99 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 ENPEPQ07075 957 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 TPD52L1Q16890 204 aaPredicted RBP19.14■□□□□ 0.65
SREBF1-211ENST00000476994 SLC10A6Q3KNW5 377 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 HSP90AA4PQ58FG1 418 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 XKR4Q5GH76 650 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 ALKAL1Q6UXT8 129 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 AGMOQ6ZNB7 445 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 FRMD5Q7Z6J6 570 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 RDH13Q8NBN7 331 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 FRMD4BQ9Y2L6 1034 aa19.14■□□□□ 0.65
SREBF1-211ENST00000476994 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 ZNF233A6NK53 670 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 KCNJ18B7U540 433 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 GNA14O95837 355 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 EPB41P11171 864 aaKnown RBP19.13■□□□□ 0.65
SREBF1-211ENST00000476994 NDUFV1P49821 464 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 OSTNP61366 133 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 HYAL1Q12794 435 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 KCNJ12Q14500 433 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 PSMD6Q15008 389 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 CTC1Q2NKJ3 1217 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 TCP11X2Q5H9J9 407 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 ADHFE1Q8IWW8 467 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 KLHL23Q8NBE8 558 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 KHSRPQ92945 711 aaKnown RBP eCLIP19.13■□□□□ 0.65
SREBF1-211ENST00000476994 SNX27Q96L92 541 aa19.13■□□□□ 0.65
SREBF1-211ENST00000476994 TRIM6Q9C030 488 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-211ENST00000476994 ELAC1Q9H777 363 aaKnown RBP19.13■□□□□ 0.65
SREBF1-211ENST00000476994 PTPRJQ12913 1337 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 FAM86C2PA6NEL3 165 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 PRR33A8MZF0 331 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 INPPL1O15357 1258 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 ITGB1P05556 798 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 AKAP5P24588 427 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 EEF1GP26641 437 aaKnown RBP19.12■□□□□ 0.65
SREBF1-211ENST00000476994 CLDN10P78369 228 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 BFSP1Q12934 665 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 SMAD4Q13485 552 aaKnown RBP19.12■□□□□ 0.65
SREBF1-211ENST00000476994 GSTCDQ8NEC7 633 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 TMC2Q8TDI7 906 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 MICAL1Q8TDZ2 1067 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 PARD3BQ8TEW8 1205 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 LPPQ93052 612 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 SLC35C1Q96A29 364 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 ACAP3Q96P50 834 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 CCDC94Q9BW85 323 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-211ENST00000476994 METTL14Q9HCE5 456 aaKnown RBP19.12■□□□□ 0.65
SREBF1-211ENST00000476994 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-211ENST00000476994 LIMA1Q9UHB6 759 aaKnown RBP19.12■□□□□ 0.65
SREBF1-211ENST00000476994 CD207Q9UJ71 328 aa19.12■□□□□ 0.65
SREBF1-211ENST00000476994 LRRC10BA6NIK2 292 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 TBKBP1A7MCY6 615 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 HOXA2O43364 376 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 DCXO43602 365 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 EOMESO95936 686 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 SKIP12755 728 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 LTBRP36941 435 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 DLG4P78352 724 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 UBE3AQ05086 875 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 ZP2Q05996 745 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 HSP90AA2PQ14568 343 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-211ENST00000476994 KRT31Q15323 416 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 SMAD2Q15796 467 aaKnown RBP19.11■□□□□ 0.65
SREBF1-211ENST00000476994 CLUL1Q15846 466 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 CCDC40Q4G0X9 1142 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 MIIPQ5JXC2 388 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 INTS8Q75QN2 995 aaKnown RBP19.11■□□□□ 0.65
SREBF1-211ENST00000476994 FAM114A1Q8IWE2 563 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 EFCAB13Q8IY85 973 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 SPPL3Q8TCT6 385 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 POF1BQ8WVV4 589 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 APOL6Q9BWW8 343 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 RPF1Q9H9Y2 349 aaKnown RBP19.11■□□□□ 0.65
SREBF1-211ENST00000476994 PDE11AQ9HCR9 933 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 TMEM161AQ9NX61 479 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 CNTN3Q9P232 1028 aa19.11■□□□□ 0.65
SREBF1-211ENST00000476994 ARMCX3Q9UH62 379 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-211ENST00000476994 LRRIQ3A6PVS8 624 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-211ENST00000476994 LACTBL1A8MY62 500 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 MBTPS2O43462 519 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 ITGA4P13612 1032 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 SPAG1Q07617 926 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 CLLU1OSQ5K130 101 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 FAM84AQ96KN4 292 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 ZMAT2Q96NC0 199 aaKnown RBP19.1■□□□□ 0.65
SREBF1-211ENST00000476994 PLEKHA5Q9HAU0 1116 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 TOPORSQ9NS56 1045 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-211ENST00000476994 GIT1Q9Y2X7 761 aa19.1■□□□□ 0.65
SREBF1-211ENST00000476994 PTGESO14684 152 aa19.09■□□□□ 0.65
SREBF1-211ENST00000476994 AP5Z1O43299 807 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms