RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 MEIS3P2A8K0S8 358 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 ITGB3P05106 788 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 COL6A1P12109 1028 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 STAT1P42224 750 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 NOP14P78316 857 aaKnown RBP21.35■■□□□ 1.01
CLK2-205ENST00000476983 CD302Q8IX05 232 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 USP38Q8NB14 1042 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 LPPQ93052 612 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 PAWRQ96IZ0 340 aaKnown RBP21.35■■□□□ 1.01
CLK2-205ENST00000476983 NHEJ1Q9H9Q4 299 aaPredicted RBP21.35■■□□□ 1.01
CLK2-205ENST00000476983 PLEKHA5Q9HAU0 1116 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 SIX4Q9UIU6 781 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 MYO6Q9UM54 1294 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 ATP11BQ9Y2G3 1177 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 SQORQ9Y6N5 450 aa21.35■■□□□ 1.01
CLK2-205ENST00000476983 ZC3H11AO75152 810 aaKnown RBP eCLIP21.34■■□□□ 1.01
CLK2-205ENST00000476983 SOX5P35711 763 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 TLE2Q04725 743 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 DSC3Q14574 896 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 HGSNATQ68CP4 663 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 SYN2Q92777 582 aaPredicted RBP21.34■■□□□ 1.01
CLK2-205ENST00000476983 ARID3AQ99856 593 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 ADAM2Q99965 735 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 IFIH1Q9BYX4 1025 aaKnown RBP21.34■■□□□ 1.01
CLK2-205ENST00000476983 IMPG2Q9BZV3 1241 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 TRMT1Q9NXH9 659 aaKnown RBP21.34■■□□□ 1.01
CLK2-205ENST00000476983 AIPL1Q9NZN9 384 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 CNTN3Q9P232 1028 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 C2CD2Q9Y426 696 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 DAAM1Q9Y4D1 1078 aa21.34■■□□□ 1.01
CLK2-205ENST00000476983 USP27XA6NNY8 438 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 FOXN3O00409 490 aaPredicted RBP21.33■■□□□ 1.01
CLK2-205ENST00000476983 MFAP3P55082 362 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 ALKAL1Q6UXT8 129 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 ANKRD33Q7Z3H0 272 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 PPP1R12CQ9BZL4 782 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 C11orf49Q9H6J7 331 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 TUBGCP4Q9UGJ1 667 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 NUB1Q9Y5A7 615 aa21.33■■□□□ 1.01
CLK2-205ENST00000476983 DCDC2CA8MYV0 355 aa21.32■■□□□ 1
CLK2-205ENST00000476983 SERPING1P05155 500 aa21.32■■□□□ 1
CLK2-205ENST00000476983 ITGA4P13612 1032 aa21.32■■□□□ 1
CLK2-205ENST00000476983 EIF4A3P38919 411 aaKnown RBP21.32■■□□□ 1
CLK2-205ENST00000476983 USP8P40818 1118 aa21.32■■□□□ 1
CLK2-205ENST00000476983 CDK17Q00537 523 aa21.32■■□□□ 1
CLK2-205ENST00000476983 KLHL30Q0D2K2 578 aa21.32■■□□□ 1
CLK2-205ENST00000476983 FAAP100Q0VG06 881 aa21.32■■□□□ 1
CLK2-205ENST00000476983 ZNF699Q32M78 642 aa21.32■■□□□ 1
CLK2-205ENST00000476983 IRF2BP2Q7Z5L9 587 aa21.32■■□□□ 1
CLK2-205ENST00000476983 ANKLE1Q8NAG6 615 aa21.32■■□□□ 1
CLK2-205ENST00000476983 RNF169Q8NCN4 708 aa21.32■■□□□ 1
CLK2-205ENST00000476983 ACRBPQ8NEB7 543 aa21.32■■□□□ 1
CLK2-205ENST00000476983 C18orf25Q96B23 403 aaPredicted RBP21.32■■□□□ 1
CLK2-205ENST00000476983 TMEM106CQ9BVX2 250 aa21.32■■□□□ 1
CLK2-205ENST00000476983 MCOLN1Q9GZU1 580 aa21.32■■□□□ 1
CLK2-205ENST00000476983 DPP3Q9NY33 737 aa21.32■■□□□ 1
CLK2-205ENST00000476983 TANC1Q9C0D5 1861 aa21.32■■□□□ 1
CLK2-205ENST00000476983 EVI5O60447 810 aa21.32■■□□□ 1
CLK2-205ENST00000476983 NBNO60934 754 aa21.32■■□□□ 1
CLK2-205ENST00000476983 ASS1P00966 412 aaKnown RBP21.32■■□□□ 1
CLK2-205ENST00000476983 POLR2BP30876 1174 aaKnown RBP21.32■■□□□ 1
CLK2-205ENST00000476983 NT5DC4Q86YG4 428 aa21.32■■□□□ 1
CLK2-205ENST00000476983 HIPK3Q9H422 1215 aa21.32■■□□□ 1
CLK2-205ENST00000476983 DEF6Q9H4E7 631 aa21.32■■□□□ 1
CLK2-205ENST00000476983 HAUS4Q9H6D7 363 aa21.32■■□□□ 1
CLK2-205ENST00000476983 SPTLC3Q9NUV7 552 aa21.32■■□□□ 1
CLK2-205ENST00000476983 SCN5AQ14524 2016 aa21.32■■□□□ 1
CLK2-205ENST00000476983 KCNJ6P48051 423 aa21.31■■□□□ 1
CLK2-205ENST00000476983 GCNT1Q02742 428 aa21.31■■□□□ 1
CLK2-205ENST00000476983 CXorf38Q8TB03 319 aa21.31■■□□□ 1
CLK2-205ENST00000476983 SCLYQ96I15 445 aa21.31■■□□□ 1
CLK2-205ENST00000476983 CCDC42Q96M95 316 aa21.31■■□□□ 1
CLK2-205ENST00000476983 ZFP42Q96MM3 310 aa21.31■■□□□ 1
CLK2-205ENST00000476983 AGAP1Q9UPQ3 857 aa21.31■■□□□ 1
CLK2-205ENST00000476983 DERAQ9Y315 318 aa21.31■■□□□ 1
CLK2-205ENST00000476983 SMIM28A0A1B0GU29 152 aa21.3■■□□□ 1
CLK2-205ENST00000476983 PITPNM1O00562 1244 aa21.3■■□□□ 1
CLK2-205ENST00000476983 NDUFA10O95299 355 aa21.3■■□□□ 1
CLK2-205ENST00000476983 FERP16591 822 aa21.3■■□□□ 1
CLK2-205ENST00000476983 MLH1P40692 756 aa21.3■■□□□ 1
CLK2-205ENST00000476983 CCL23P55773 120 aa21.3■■□□□ 1
CLK2-205ENST00000476983 CUL2Q13617 745 aa21.3■■□□□ 1
CLK2-205ENST00000476983 SGSM1Q2NKQ1 1148 aa21.3■■□□□ 1
CLK2-205ENST00000476983 SCARA5Q6ZMJ2 495 aa21.3■■□□□ 1
CLK2-205ENST00000476983 HACE1Q8IYU2 909 aa21.3■■□□□ 1
CLK2-205ENST00000476983 XYLT2Q9H1B5 865 aa21.3■■□□□ 1
CLK2-205ENST00000476983 EPN1Q9Y6I3 576 aaPredicted RBP21.3■■□□□ 1
CLK2-205ENST00000476983 CYLC1P35663 651 aaPredicted RBP21.3■■□□□ 1
CLK2-205ENST00000476983 RAB27AP51159 221 aa21.3■■□□□ 1
CLK2-205ENST00000476983 GPNMBQ14956 572 aa21.3■■□□□ 1
CLK2-205ENST00000476983 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
CLK2-205ENST00000476983 BEST2Q8NFU1 509 aa21.3■■□□□ 1
CLK2-205ENST00000476983 LINC01599Q8WXQ3 324 aa21.3■■□□□ 1
CLK2-205ENST00000476983 SHC3Q92529 594 aa21.3■■□□□ 1
CLK2-205ENST00000476983 ITGA11Q9UKX5 1188 aa21.3■■□□□ 1
CLK2-205ENST00000476983 POLIQ9UNA4 740 aa21.3■■□□□ 1
CLK2-205ENST00000476983 PPP2R2CQ9Y2T4 447 aa21.3■■□□□ 1
CLK2-205ENST00000476983 KIAA0100Q14667 2235 aaKnown RBP21.29■■□□□ 1
CLK2-205ENST00000476983 PPEF2O14830 753 aa21.29■■□□□ 1
CLK2-205ENST00000476983 ATF7P17544 494 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms