RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 MFSD5Q6N075 450 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 ZKSCAN4Q969J2 545 aaPredicted RBP22.46■■□□□ 1.19
LIMS2-214ENST00000476932 DDX23Q9BUQ8 820 aaKnown RBP22.46■■□□□ 1.19
LIMS2-214ENST00000476932 PLVAPQ9BX97 442 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 A1CFQ9NQ94 594 aaKnown RBP22.46■■□□□ 1.19
LIMS2-214ENST00000476932 HACL1Q9UJ83 578 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 SPATA31C2B4DYI2 1134 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 O00370 1275 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 ATP4AP20648 1035 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 CDR1P51861 262 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 CALCOCO2Q13137 446 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 DRP2Q13474 957 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 PTK6Q13882 451 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 CROCCP2Q86T23 111 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 CCDC25Q86WR0 208 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 CACNA2D3Q8IZS8 1091 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 ZNF280CQ8ND82 737 aa22.46■■□□□ 1.19
LIMS2-214ENST00000476932 JPH2Q9BR39 696 aaPredicted RBP22.46■■□□□ 1.19
LIMS2-214ENST00000476932 APOBEC3GQ9HC16 384 aaKnown RBP22.46■■□□□ 1.19
LIMS2-214ENST00000476932 R3HDM2Q9Y2K5 976 aaKnown RBP22.46■■□□□ 1.19
LIMS2-214ENST00000476932 PTPRAP18433 802 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 CHKAP35790 457 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 SLC1A1P43005 524 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 ACOT2P49753 483 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 HMGCS2P54868 508 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 TRMT10CQ7L0Y3 403 aaKnown RBP22.45■■□□□ 1.18
LIMS2-214ENST00000476932 ASAP3Q8TDY4 903 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 KCNN1Q92952 543 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 TRIM11Q96F44 468 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 C12orf42Q96LP6 360 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 DCLK3Q9C098 648 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 KIAA1586Q9HCI6 787 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 ZNF541Q9H0D2 1346 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 VGLL3A8MV65 326 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 H0YCG3 227 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 RASGRF2O14827 1237 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 SUPT20HL2P0C7V6 817 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 HNRNPH1P31943 449 aaKnown RBP22.45■■□□□ 1.18
LIMS2-214ENST00000476932 PIK3CAP42336 1068 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 SP2Q02086 613 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 SUPT20HL1Q3ZLR7 823 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 XKR3Q5GH77 459 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 CCDC13Q8IYE1 715 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 JDP2Q8WYK2 163 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 ZNF112Q9UJU3 913 aa22.45■■□□□ 1.18
LIMS2-214ENST00000476932 PROSCO94903 275 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 TNNI1P19237 187 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 NSFP46459 744 aaKnown RBP22.44■■□□□ 1.18
LIMS2-214ENST00000476932 PTP4A2Q12974 167 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 KLF1Q13351 362 aaPredicted RBP22.44■■□□□ 1.18
LIMS2-214ENST00000476932 ZBTB41Q5SVQ8 909 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 GKAP1Q5VSY0 366 aaPredicted RBP22.44■■□□□ 1.18
LIMS2-214ENST00000476932 BBXQ8WY36 941 aaPredicted RBP22.44■■□□□ 1.18
LIMS2-214ENST00000476932 TMEM143Q96AN5 459 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 CDHR1Q96JP9 859 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 CABS1Q96KC9 395 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 AGO2Q9UKV8 859 aaKnown RBP22.44■■□□□ 1.18
LIMS2-214ENST00000476932 FZD1Q9UP38 647 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 WDR90Q96KV7 1748 aa22.44■■□□□ 1.18
LIMS2-214ENST00000476932 PIGRP01833 764 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 EDN1P05305 212 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 NOMO3P69849 1222 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 PLCB4Q15147 1175 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 WDR44Q5JSH3 913 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 CCDC121Q6ZUS5 278 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 CPLX4Q7Z7G2 160 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 SUGP1Q8IWZ8 645 aaKnown RBP22.43■■□□□ 1.18
LIMS2-214ENST00000476932 MICALL2Q8IY33 904 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 ZBTB45Q96K62 511 aaPredicted RBP22.43■■□□□ 1.18
LIMS2-214ENST00000476932 FNBP1Q96RU3 617 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 CCDC134Q9H6E4 229 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 ASIC3Q9UHC3 531 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 NEU2Q9Y3R4 380 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 GLRA2P23416 452 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 RPS12P25398 132 aaKnown RBP22.43■■□□□ 1.18
LIMS2-214ENST00000476932 BPIFB4P59827 614 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 CUL2Q13617 745 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 MIS18BP1Q6P0N0 1132 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 SNF8Q96H20 258 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 MTFR1LQ9H019 292 aa22.43■■□□□ 1.18
LIMS2-214ENST00000476932 NFKBIEO00221 500 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 DNM1LO00429 736 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 ATP2A1O14983 1001 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 ITIH2P19823 946 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 ABCD1P33897 745 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 POLGP54098 1239 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-214ENST00000476932 TAS2R40P59535 323 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 ANKRD20A8PQ5CZ79 823 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 SYDE1Q6ZW31 735 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-214ENST00000476932 PASD1Q8IV76 773 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 C11orf70Q9BRQ4 267 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 GMPSP49915 693 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-214ENST00000476932 LONRF1Q17RB8 773 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 MAIP1Q8WWC4 291 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 WRNIP1Q96S55 665 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 CEP89Q96ST8 783 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 TEX13BQ9BXU2 312 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 ROPN1BQ9BZX4 212 aaPredicted RBP22.42■■□□□ 1.18
LIMS2-214ENST00000476932 PORCNQ9H237 461 aa22.42■■□□□ 1.18
LIMS2-214ENST00000476932 DHX33Q9H6R0 707 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms