RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 ADSSP30520 456 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 RPL9P32969 192 aaKnown RBP23.05■■□□□ 1.28
LIME1-204ENST00000476183 CREMQ03060 361 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 ZBTB6Q15916 424 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 KYAT1Q16773 422 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 RESP18Q5W5W9 173 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 GPR149Q86SP6 731 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 IQUBQ8NA54 791 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 KIF12Q96FN5 646 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 RIPOR3Q96MK2 946 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 TRIM9Q9C026 710 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 RPF1Q9H9Y2 349 aaKnown RBP23.05■■□□□ 1.28
LIME1-204ENST00000476183 MUTYHQ9UIF7 546 aa23.05■■□□□ 1.28
LIME1-204ENST00000476183 SPDYE4A6NLX3 237 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 POLR2DO15514 142 aaKnown RBP23.04■■□□□ 1.28
LIME1-204ENST00000476183 DCXO43602 365 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 RFPL2O75678 378 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 GCNT3O95395 438 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 C1RP00736 705 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 PPP2R3AQ06190 1150 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 ATAT1Q5SQI0 421 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 L1TD1Q5T7N2 865 aaKnown RBP23.04■■□□□ 1.28
LIME1-204ENST00000476183 ADALQ6DHV7 355 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 C1QTNF1Q9BXJ1 281 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 ANK1P16157 1881 aa23.04■■□□□ 1.28
LIME1-204ENST00000476183 DENND4AQ7Z401 1863 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 ACOT2P49753 483 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 GUCY2FP51841 1108 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 SLFN12LQ6IEE8 588 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 RSPO2Q6UXX9 243 aaPredicted RBP23.03■■□□□ 1.28
LIME1-204ENST00000476183 CCDC65Q8IXS2 484 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 GLIS3Q8NEA6 775 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 CMASQ8NFW8 434 aaPredicted RBP23.03■■□□□ 1.28
LIME1-204ENST00000476183 HPS3Q969F9 1004 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 ACCSQ96QU6 501 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 MTRRQ9UBK8 725 aa23.03■■□□□ 1.28
LIME1-204ENST00000476183 AGO2Q9UKV8 859 aaKnown RBP23.03■■□□□ 1.28
LIME1-204ENST00000476183 TCHHQ07283 1943 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 FAM86C2PA6NEL3 165 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 TRAPPC3O43617 180 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 ALADP13716 330 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 LRPAP1P30533 357 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 PDXDC1Q6P996 788 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 KREMEN2Q8NCW0 462 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 HDAC7Q8WUI4 952 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 LEO1Q8WVC0 666 aaPredicted RBP23.02■■□□□ 1.28
LIME1-204ENST00000476183 ZNF707Q96C28 371 aaPredicted RBP23.02■■□□□ 1.28
LIME1-204ENST00000476183 FAM212AQ96EL1 285 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 LRRC27Q9C0I9 530 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 PLEKHA4Q9H4M7 779 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 FAM13BQ9NYF5 915 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 UBQLN1Q9UMX0 589 aaKnown RBP23.02■■□□□ 1.28
LIME1-204ENST00000476183 PCDHB13Q9Y5F0 798 aa23.02■■□□□ 1.28
LIME1-204ENST00000476183 CCDC195A0A1B0GUA6 201 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 C2CD4DB7Z1M9 353 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 PRPF6O94906 941 aaKnown RBP23.01■■□□□ 1.27
LIME1-204ENST00000476183 PAPLNO95428 1278 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 CYP3A5P20815 502 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 CASP1P29466 404 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 JADE1Q6IE81 842 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 CNNM4Q6P4Q7 775 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 CRELD2Q6UXH1 353 aaPredicted RBP23.01■■□□□ 1.27
LIME1-204ENST00000476183 C15orf39Q6ZRI6 1047 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 ZSWIM2Q8NEG5 633 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 POMGNT1Q8WZA1 660 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 C7orf25Q9BPX7 421 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 DPP7Q9UHL4 492 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 FBXW11Q9UKB1 542 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 EXOC7Q9UPT5 735 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 NUB1Q9Y5A7 615 aa23.01■■□□□ 1.27
LIME1-204ENST00000476183 NFICP08651 508 aa23■■□□□ 1.27
LIME1-204ENST00000476183 OR1D2P34982 312 aa23■■□□□ 1.27
LIME1-204ENST00000476183 ASIC1P78348 528 aa23■■□□□ 1.27
LIME1-204ENST00000476183 AMPD3Q01432 767 aa23■■□□□ 1.27
LIME1-204ENST00000476183 VARS2Q5ST30 1063 aaKnown RBP23■■□□□ 1.27
LIME1-204ENST00000476183 CD302Q8IX05 232 aa23■■□□□ 1.27
LIME1-204ENST00000476183 SUSD3Q96L08 255 aa23■■□□□ 1.27
LIME1-204ENST00000476183 MAGEF1Q9HAY2 307 aa23■■□□□ 1.27
LIME1-204ENST00000476183 KCNH3Q9ULD8 1083 aa23■■□□□ 1.27
LIME1-204ENST00000476183 NR2E1Q9Y466 385 aa23■■□□□ 1.27
LIME1-204ENST00000476183 BACE2Q9Y5Z0 518 aa23■■□□□ 1.27
LIME1-204ENST00000476183 CDY1Q9Y6F8 540 aa23■■□□□ 1.27
LIME1-204ENST00000476183 MYO10Q9HD67 2058 aa23■■□□□ 1.27
LIME1-204ENST00000476183 DOCK6Q96HP0 2047 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 TECTAO75443 2155 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 PPEF2O14830 753 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 GPR37L1O60883 481 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 MCM4P33991 863 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 KRT85P78386 507 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 ALCAMQ13740 583 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 RAB33AQ14088 237 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 POSTNQ15063 836 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 SPATA1Q5VX52 437 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 ELMSAN1Q6PJG2 1045 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 ANKS3Q6ZW76 656 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 TSPAN18Q96SJ8 248 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 LRFN3Q9BTN0 628 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 RHOBTB2Q9BYZ6 727 aa22.99■■□□□ 1.27
LIME1-204ENST00000476183 BLZF1Q9H2G9 400 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms