RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PTGISQ16647 500 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 TMEM67Q5HYA8 995 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 SNAP47Q5SQN1 464 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 CDKAL1Q5VV42 579 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 CNKSR3Q6P9H4 555 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 FBXL19Q6PCT2 694 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 METTL7BQ6UX53 244 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 STOX1Q6ZVD7 989 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 LRRC8DQ7L1W4 858 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 CILP2Q8IUL8 1156 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 TMTC2Q8N394 836 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 C7orf31Q8N865 590 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 NECAB1Q8N987 351 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 GOLM1Q8NBJ4 401 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 GIMAP8Q8ND71 665 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-206ENST00000476045 AFG1LQ8WV93 481 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 ATXN2LQ8WWM7 1075 aaKnown RBP4.78□□□□□ -1.64
VPS13D-206ENST00000476045 CUL5Q93034 780 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 SYAP1Q96A49 352 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-206ENST00000476045 IL17RAQ96F46 866 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 DRC1Q96MC2 740 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 GLT8D2Q9H1C3 349 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 TRPV6Q9H1D0 765 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 RIOX1Q9H6W3 641 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 JMJD4Q9H9V9 463 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 SP110Q9HB58 689 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 INCENPQ9NQS7 918 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 TRMT13Q9NUP7 481 aaKnown RBP4.78□□□□□ -1.64
VPS13D-206ENST00000476045 ZSWIM5Q9P217 1185 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 MAD2L2Q9UI95 211 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 LIMCH1Q9UPQ0 1083 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 ZNF281Q9Y2X9 895 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 R3HCC1Q9Y3T6 440 aaKnown RBP4.78□□□□□ -1.64
VPS13D-206ENST00000476045 MYO7AQ13402 2215 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 CACNA1HO95180 2353 aa4.78□□□□□ -1.64
VPS13D-206ENST00000476045 UMODL1Q5DID0 1318 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ABHD14A-ACY1A0A1B0GW23 586 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 MEIS3P2A8K0S8 358 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 UPK3BL1B0FP48 263 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 UPK3BL2E5RIL1 263 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 RBAK-RBAKDNI3L0D1 243 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 HAS3O00219 553 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 NOP56O00567 594 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SCAMP3O14828 347 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 FIBPO43427 364 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 PPFIA4O75335 1185 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 OFD1O75665 1012 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 CBX7O95931 251 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 TPM2P07951 284 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 GLI1P08151 1106 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ACRP10323 421 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 POU3F3P20264 500 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 GJB2P29033 226 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 HOXC8P31273 242 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ICAM3P32942 547 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 MCM5P33992 734 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 LIFRP42702 1097 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 CCL23P55773 120 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 TROAPQ12815 778 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 KRT32Q14532 448 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 PGM5Q15124 567 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 KIAA0753Q2KHM9 967 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ADCK5Q3MIX3 580 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 FYB2Q5VWT5 728 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SEPT14Q6ZU15 432 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 C16orf59Q7L2K0 433 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 OTOP2Q7RTS6 562 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SERINC5Q86VE9 423 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 TSPYL5Q86VY4 417 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 HOMER1Q86YM7 354 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 DHX37Q8IY37 1157 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 MB21D2Q8IYB1 491 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF654Q8IZM8 581 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 APBB2Q92870 758 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 UBE2FQ969M7 185 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 CHMP4CQ96CF2 233 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 RRP36Q96EU6 259 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SCLYQ96I15 445 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SPATA33Q96N06 139 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SAMD11Q96NU1 681 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 INPP4AQ96PE3 977 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 SENP7Q9BQF6 1050 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 UBA5Q9GZZ9 404 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 TRIT1Q9H3H1 467 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 FAM53CQ9NYF3 392 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 COG5Q9UP83 839 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 RBM8AQ9Y5S9 174 aaKnown RBP4.77□□□□□ -1.65
VPS13D-206ENST00000476045 ZDBF2Q9HCK1 2354 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 EVPLQ92817 2033 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 NID2Q14112 1375 aa4.77□□□□□ -1.65
VPS13D-206ENST00000476045 VPS37CA5D8V6 355 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CCDC69A6NI79 296 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 E7EWF7 191 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 RGS13O14921 159 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 SLC27A2O14975 620 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 EPB41L2O43491 1005 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 STX6O43752 255 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TRIOO75962 3097 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms