RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PIM1P11309 404 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 NEK2P51955 445 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 DSG1Q02413 1049 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 TTLL12Q14166 644 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 PLEKHG4Q58EX7 1191 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 PHLDB3Q6NSJ2 640 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 OTOAQ7RTW8 1153 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 SLC13A5Q86YT5 568 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 ST13P4Q8IZP2 240 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 RIBC1Q8N443 379 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 DNAJC1Q96KC8 554 aaKnown RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 ECSITQ9BQ95 431 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 LBHD1Q9BQE6 289 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 GCNT4Q9P109 453 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 FBXO9Q9UK97 447 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-205ENST00000475993 ANGPTL2Q9UKU9 493 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 TIMM22Q9Y584 194 aa11.2□□□□□ -0.62
ABCF1-205ENST00000475993 GTPBP10A4D1E9 387 aaKnown RBP11.19□□□□□ -0.62
ABCF1-205ENST00000475993 A6NJR5 290 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 GYG2O15488 501 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 PDGFRBP09619 1106 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 IVDP26440 423 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 CRABP2P29373 138 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 SERPINB3P29508 390 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 STAT4Q14765 748 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 TCEAL1Q15170 157 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 USH1GQ495M9 461 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 HERC4Q5GLZ8 1057 aaPredicted RBP11.19□□□□□ -0.62
ABCF1-205ENST00000475993 TBC1D9BQ66K14 1250 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 IZUMO2Q6UXV1 221 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 TRABD2AQ86V40 505 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ZNF384Q8TF68 577 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ORAI2Q96SN7 254 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ARL8BQ9NVJ2 186 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 TAS2R14Q9NYV8 317 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ARPP21Q9UBL0 812 aaPredicted RBP11.19□□□□□ -0.62
ABCF1-205ENST00000475993 DDX25Q9UHL0 483 aaKnown RBP11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ZMYM2Q9UBW7 1377 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 A0A1W2PRG0 241 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 EDIL3O43854 480 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 RNASEH1O60930 286 aaKnown RBP11.19□□□□□ -0.62
ABCF1-205ENST00000475993 SPAG7O75391 227 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 GSTT2P0CG29 244 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 GSTT2BP0CG30 244 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ARPC4P59998 168 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 SYDE2Q5VT97 1194 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 RSPH1Q8WYR4 309 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 IRGQQ8WZA9 623 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 SLC35C1Q96A29 364 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 MPP4Q96JB8 637 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 EPB41L1Q9H4G0 881 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 ROBO3Q96MS0 1386 aa11.19□□□□□ -0.62
ABCF1-205ENST00000475993 CYP2D6P10635 497 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 KRT17Q04695 432 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 NR1H3Q13133 447 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 THOC5Q13769 683 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 DCAF17Q5H9S7 520 aaPredicted RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 PEX5LQ8IYB4 626 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 CD101Q93033 1021 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 MCUR1Q96AQ8 359 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SNF8Q96H20 258 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 DYDC2Q96IM9 177 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 NSL1Q96IY1 281 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 DNAJC18Q9H819 358 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 DNAJC17Q9NVM6 304 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 COL18A1P39060 1754 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 ZNF804BA4D1E1 1349 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SMIM31A0A1B0GVY4 71 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 BTBD19C9JJ37 291 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 F8W8V4 182 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 AKAP3O75969 853 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 FGFR1P11362 822 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 HALP42357 657 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 GPSM2P81274 684 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 PPP2R5CQ13362 524 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 HNRNPDQ14103 355 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 R3HDM1Q15032 1099 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TMED2Q15363 201 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SH3D19Q5HYK7 790 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 HYIQ5T013 277 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 ACAD11Q709F0 780 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 SREK1Q8WXA9 508 aaKnown RBP11.18□□□□□ -0.62
ABCF1-205ENST00000475993 ATP6V0A1Q93050 837 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 FNBP1Q96RU3 617 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 CCDC77Q9BR77 488 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 STK33Q9BYT3 514 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TAS2R1Q9NYW7 299 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 ITGB1BP2Q9UKP3 347 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 KIAA1551Q9HCM1 1747 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TIMM44O43615 452 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 HAUS5O94927 633 aa11.18□□□□□ -0.62
ABCF1-205ENST00000475993 TDP2O95551 362 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms