RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 IGSF22Q8N9C0 903 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ELSPBP1Q96BH3 223 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 RMDN1Q96DB5 314 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 MCRS1Q96EZ8 462 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ACAP3Q96P50 834 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 TCHPQ9BT92 498 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 C17orf75Q9HAS0 396 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 PTPRHQ9HD43 1115 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 KMT5AQ9NQR1 393 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ARHGAP28Q9P2N2 729 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 DNM3Q9UQ16 869 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 MRPS17Q9Y2R5 130 aaKnown RBP11.87□□□□□ -0.51
CDRT1-205ENST00000475944 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 PCDHGA2Q9Y5H1 932 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 FANCMQ8IYD8 2048 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 DOCK6Q96HP0 2047 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 PATJQ8NI35 1801 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 WDR27A2RRH5 827 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 LAD1O00515 517 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 HIP1RO75146 1068 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 KCNE1P15382 129 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 CEBPBP17676 345 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 CD72P21854 359 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 TARSP26639 723 aaKnown RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 RPS9P46781 194 aaKnown RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 ARPP19P56211 112 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 CSTF1Q05048 431 aaKnown RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 NBR1Q14596 966 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 KRT79Q5XKE5 535 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 TPGS2Q68CL5 300 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 MPZL3Q6UWV2 235 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 TCEAL8Q8IYN2 117 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 DAW1Q8N136 415 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 ELMOD1Q8N336 334 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 C4orf32Q8N8J7 132 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 SUMF1Q8NBK3 374 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 ATRIPQ8WXE1 791 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 DNASE1L2Q92874 299 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 TIPINQ9BVW5 301 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 CNTN3Q9P232 1028 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 MTF2Q9Y483 593 aaPredicted RBP11.86□□□□□ -0.51
CDRT1-205ENST00000475944 COL4A3Q01955 1670 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 NOTCH4Q99466 2003 aa11.86□□□□□ -0.51
CDRT1-205ENST00000475944 GVINP1Q7Z2Y8 2422 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 E9PMD0 336 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 TBC1D4O60343 1298 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 MICAL2O94851 1124 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 PROZP22891 400 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDRT1-205ENST00000475944 STRN3Q13033 797 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 PTGDRQ13258 359 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 CTXN3Q4LDR2 81 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 CYP4A22Q5TCH4 519 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 TANGO2Q6ICL3 276 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 IQCEQ6IPM2 695 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 ZNF280DQ6N043 979 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
CDRT1-205ENST00000475944 TAS1R3Q7RTX0 852 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 DGLUCYQ7Z3D6 616 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 APPL2Q8NEU8 664 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 SECISBP2LQ93073 1101 aaKnown RBP11.85□□□□□ -0.51
CDRT1-205ENST00000475944 CLDN23Q96B33 292 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 SUSD3Q96L08 255 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 PLA2G2FQ9BZM2 168 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 BRD9Q9H8M2 597 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 ZFP14Q9HCL3 533 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
CDRT1-205ENST00000475944 HEBP1Q9NRV9 189 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 NCDNQ9UBB6 729 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 FBXL5Q9UKA1 691 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 MAFFQ9ULX9 164 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 INSL5Q9Y5Q6 135 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 SPTBN4Q9H254 2564 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 TRIP11Q15643 1979 aa11.85□□□□□ -0.51
CDRT1-205ENST00000475944 MAN2B1O00754 1011 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 ABLIM1O14639 778 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 HARSP12081 509 aaKnown RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 MCM4P33991 863 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 PRPHP41219 470 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 ADCY1Q08828 1119 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 MAPK7Q13164 816 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 MRPL58Q14197 206 aaKnown RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 NOLC1Q14978 699 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 PRSS36Q5K4E3 855 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 RINT1Q6NUQ1 792 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 DTHD1Q6ZMT9 781 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 C1orf186Q6ZWK4 172 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 DCLK2Q8N568 766 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 LEMD2Q8NC56 503 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 ZBTB44Q8NCP5 570 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms