RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 RSPO4Q2I0M5 234 aaPredicted RBP17.26■□□□□ 0.35
CDPF1-206ENST00000475605 VARS2Q5ST30 1063 aaKnown RBP17.26■□□□□ 0.35
CDPF1-206ENST00000475605 SLC8B1Q6J4K2 584 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 ALKAL1Q6UXT8 129 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 RTL10Q7L3V2 364 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 ZNF461Q8TAF7 563 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 TCEAL4Q96EI5 215 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 CORO1BQ9BR76 489 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 CDT1Q9H211 546 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 DLL3Q9NYJ7 618 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 GDE1Q9NZC3 331 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 KIAA1024Q9UPX6 916 aa17.26■□□□□ 0.35
CDPF1-206ENST00000475605 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.26■□□□□ 0.35
CDPF1-206ENST00000475605 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 ARHGEF37A1IGU5 675 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 PRRG1O14668 218 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 SPTLC1O15269 473 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 LRG1P02750 347 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 FCARP24071 287 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 GRM5P41594 1212 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 CCR2P41597 374 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 GRM2Q14416 872 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 NBR1Q14596 966 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 XKR4Q5GH76 650 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 PRSS36Q5K4E3 855 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 ZBTB44Q8NCP5 570 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 ATRIPQ8WXE1 791 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 KIFAP3Q92845 792 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 ACO2Q99798 780 aaKnown RBP17.25■□□□□ 0.35
CDPF1-206ENST00000475605 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 AVENQ9NQS1 362 aaPredicted RBP17.25■□□□□ 0.35
CDPF1-206ENST00000475605 NCDNQ9UBB6 729 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 PCDHGA2Q9Y5H1 932 aa17.25■□□□□ 0.35
CDPF1-206ENST00000475605 CCDC169A6NNP5 214 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 PODXLO00592 558 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 MEFVO15553 781 aaPredicted RBP17.24■□□□□ 0.35
CDPF1-206ENST00000475605 TBC1D4O60343 1298 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 ELF1P32519 619 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 MAGEA9P43362 315 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 NPTX2P47972 431 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 YARSP54577 528 aaKnown RBP17.24■□□□□ 0.35
CDPF1-206ENST00000475605 PEX3P56589 373 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 ZNF568Q3ZCX4 644 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 FAM78AQ5JUQ0 283 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 ZNF852Q6ZMS4 543 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 TAS1R3Q7RTX0 852 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 DAW1Q8N136 415 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 C4orf32Q8N8J7 132 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 NELL1Q92832 810 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 ELSPBP1Q96BH3 223 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 NELL2Q99435 816 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 CCDC94Q9BW85 323 aaPredicted RBP17.24■□□□□ 0.35
CDPF1-206ENST00000475605 CYP4F11Q9HBI6 524 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
CDPF1-206ENST00000475605 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
CDPF1-206ENST00000475605 E9PMD0 336 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 LILRB5O75023 590 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
CDPF1-206ENST00000475605 ATF2P15336 505 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 MUTP22033 750 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 MTAPQ13126 283 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 HAUS3Q68CZ6 603 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 APBB1IPQ7Z5R6 666 aaPredicted RBP17.23■□□□□ 0.35
CDPF1-206ENST00000475605 TCEAL8Q8IYN2 117 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 HS6ST3Q8IZP7 471 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 ZNF687Q8N1G0 1237 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 TMEM130Q8N3G9 435 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 C18orf25Q96B23 403 aaPredicted RBP17.23■□□□□ 0.35
CDPF1-206ENST00000475605 ZSWIM3Q96MP5 696 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 TARS2Q9BW92 718 aaKnown RBP17.23■□□□□ 0.35
CDPF1-206ENST00000475605 ZSCAN32Q9NX65 697 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 FBXL5Q9UKA1 691 aa17.23■□□□□ 0.35
CDPF1-206ENST00000475605 NDRG2Q9UN36 371 aaKnown RBP17.23■□□□□ 0.35
CDPF1-206ENST00000475605 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
CDPF1-206ENST00000475605 ABLIM1O14639 778 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 NCAM2O15394 837 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 HARSP12081 509 aaKnown RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 RPS9P46781 194 aaKnown RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 FXR2P51116 673 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 ADCY1Q08828 1119 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 ORC2Q13416 577 aaPredicted RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 MRPL58Q14197 206 aaKnown RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 FOXP1Q9H334 677 aaPredicted RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 BRD9Q9H8M2 597 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 TOPORSQ9NS56 1045 aaPredicted RBP17.22■□□□□ 0.35
CDPF1-206ENST00000475605 NUB1Q9Y5A7 615 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 INSL5Q9Y5Q6 135 aa17.22■□□□□ 0.35
CDPF1-206ENST00000475605 PHLPP2Q6ZVD8 1323 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 PP2D1A8MPX8 630 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 SYN3O14994 580 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 HIP1RO75146 1068 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 MOSPD3O75425 235 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 KCNE1P15382 129 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 GJA1P17302 382 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 PROZP22891 400 aa17.21■□□□□ 0.35
CDPF1-206ENST00000475605 CTXN3Q4LDR2 81 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms