RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TMEM200CA6NKL6 621 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 DTNBO60941 627 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 GCSHP23434 173 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 ZFP36P26651 326 aaKnown RBP8.35□□□□□ -1.07
SMC5-203ENST00000475540 ZNF280AP59817 542 aaPredicted RBP8.35□□□□□ -1.07
SMC5-203ENST00000475540 TTF1Q15361 905 aaPredicted RBP8.35□□□□□ -1.07
SMC5-203ENST00000475540 SPDYE7PQ495Y7 208 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 PABPC1LQ4VXU2 614 aaKnown RBP8.35□□□□□ -1.07
SMC5-203ENST00000475540 MAPKAPK5Q8IW41 473 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 ULK2Q8IYT8 1036 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 AMER2Q8N7J2 671 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 DCBLD1Q8N8Z6 715 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 RNPEPQ9H4A4 650 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 TCF7L1Q9HCS4 588 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 ANKRD6Q9Y2G4 727 aa8.35□□□□□ -1.07
SMC5-203ENST00000475540 A0A1B0GTW7 788 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 GRM6O15303 877 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 SLPIP03973 132 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
SMC5-203ENST00000475540 TGFB2P61812 414 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 ARMC6Q6NXE6 501 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 FOXR2Q6PJQ5 311 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 CPEB3Q8NE35 698 aaKnown RBP8.34□□□□□ -1.07
SMC5-203ENST00000475540 IL17RDQ8NFM7 739 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 TBC1D15Q8TC07 691 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 NSUN6Q8TEA1 469 aaKnown RBP8.34□□□□□ -1.07
SMC5-203ENST00000475540 NUP133Q8WUM0 1156 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 DMRTA2Q96SC8 542 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 PRRX2Q99811 253 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 MRIQ9BWK5 157 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 ING1Q9UK53 422 aaPredicted RBP8.34□□□□□ -1.07
SMC5-203ENST00000475540 MAP3K2Q9Y2U5 619 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 HS3ST4Q9Y661 456 aa8.34□□□□□ -1.07
SMC5-203ENST00000475540 CENPVL1A0A0U1RR11 272 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 PRSS23O95084 383 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 CFIP05156 583 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 POU2F2P09086 479 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 AKAP5P24588 427 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 DDX6P26196 483 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMC5-203ENST00000475540 DSC2Q02487 901 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 TLE1Q04724 770 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 RESTQ13127 1097 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 KHDC1Q4VXA5 237 aaKnown RBP8.33□□□□□ -1.08
SMC5-203ENST00000475540 THEMIS2Q5TEJ8 643 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 USP45Q70EL2 814 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 TMEM132CQ8N3T6 1108 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 VRK1Q99986 396 aaPredicted RBP8.33□□□□□ -1.08
SMC5-203ENST00000475540 MLST8Q9BVC4 326 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 POLHQ9Y253 713 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 NOX1Q9Y5S8 564 aa8.33□□□□□ -1.08
SMC5-203ENST00000475540 E2F8A0AVK6 867 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 CDHR4A6H8M9 788 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 TMEM191CA6NGB0 347 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 LPXNO60711 386 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 HAUS5O94927 633 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 GPANK1O95872 356 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 SMARCA1P28370 1054 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 HMGA2P52926 109 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 GUCY1B3Q02153 619 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 ZNF627Q7L945 461 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 ARHGEF19Q8IW93 802 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 PRR18Q8N4B5 295 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 C3orf20Q8ND61 904 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 MARS2Q96GW9 593 aaKnown RBP8.32□□□□□ -1.08
SMC5-203ENST00000475540 PNKPQ96T60 521 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 NUP88Q99567 741 aaPredicted RBP8.32□□□□□ -1.08
SMC5-203ENST00000475540 ZSWIM1Q9BR11 485 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 PACSIN1Q9BY11 444 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
SMC5-203ENST00000475540 SBK3P0C264 359 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 PF4V1P10720 104 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 NOMO3P69849 1222 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 DPTQ07507 201 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 MCL1Q07820 350 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 NOMO2Q5JPE7 1267 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 UTP14CQ5TAP6 766 aaKnown RBP8.31□□□□□ -1.08
SMC5-203ENST00000475540 FAM43AQ8N2R8 423 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 AOPEPQ8N6M6 819 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 RNF181Q9P0P0 153 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 ANKFY1Q9P2R3 1169 aa8.31□□□□□ -1.08
SMC5-203ENST00000475540 SLC16A6O15403 523 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 ARIH2O95376 493 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 CD1AP06126 327 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 ELANEP08246 267 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 MALP21145 153 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 FGFR4P22455 802 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 HSD11B2P80365 405 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 OCA2Q04671 838 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 SNAPC2Q13487 334 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 LAIR1Q6GTX8 287 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 SERHL2Q9H4I8 314 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 CYP4F11Q9HBI6 524 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 JKAMPQ9P055 326 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 MTO1Q9Y2Z2 717 aaKnown RBP8.3□□□□□ -1.08
SMC5-203ENST00000475540 AATKQ6ZMQ8 1374 aa8.3□□□□□ -1.08
SMC5-203ENST00000475540 UNC119BA6NIH7 251 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 SLC43A1O75387 559 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 ERN1O75460 977 aaKnown RBP8.29□□□□□ -1.08
SMC5-203ENST00000475540 CDKL5O76039 1030 aa8.29□□□□□ -1.08
SMC5-203ENST00000475540 ABLIM3O94929 683 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms