RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
CPSF3-203ENST00000475482 PDCD11Q14690 1871 aaKnown RBP17.03■□□□□ 0.32
CPSF3-203ENST00000475482 MYMKA6NI61 221 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 PRR33A8MZF0 331 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 IKBKBO14920 756 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 MAPTP10636 758 aaKnown RBP17.03■□□□□ 0.32
CPSF3-203ENST00000475482 KLRC2P26717 231 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 CASP1P29466 404 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 MTHFRP42898 656 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 ZNF131P52739 623 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 KMT5BQ4FZB7 885 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 KIAA1841Q6NSI8 718 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 CES5AQ6NT32 575 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 APBB1IPQ7Z5R6 666 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-203ENST00000475482 C12orf76Q8N812 135 aaPredicted RBP17.03■□□□□ 0.32
CPSF3-203ENST00000475482 CEP120Q8N960 986 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 RPGRIP1Q96KN7 1286 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 RHOBTB2Q9BYZ6 727 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 POMKQ9H5K3 350 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 FNIP2Q9P278 1114 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 GDAQ9Y2T3 454 aa17.03■□□□□ 0.32
CPSF3-203ENST00000475482 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 FAM86C2PA6NEL3 165 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 TMEM189-UBE2V1I3L0A0 370 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 C2CD2LO14523 706 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 KLRC4O43908 158 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 KIF20AO95235 890 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 ADH1AP07327 375 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 MCF2P10911 925 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 IDEP14735 1019 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 SMTNP53814 917 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 NCKAP1LP55160 1127 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 ZNF568Q3ZCX4 644 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 RARS2Q5T160 578 aaKnown RBP17.02■□□□□ 0.32
CPSF3-203ENST00000475482 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 CD300LGQ6UXG3 332 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 ZPBP2Q6X784 338 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 DYMQ7RTS9 669 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 GPR149Q86SP6 731 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
CPSF3-203ENST00000475482 FEZF2Q8TBJ5 459 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 RABGGTAQ92696 567 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 SFXN1Q9H9B4 322 aa17.02■□□□□ 0.32
CPSF3-203ENST00000475482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.02■□□□□ 0.32
CPSF3-203ENST00000475482 LARSQ9P2J5 1176 aaKnown RBP17.02■□□□□ 0.32
CPSF3-203ENST00000475482 SF3B1O75533 1304 aaKnown RBP eCLIP17.01■□□□□ 0.31
CPSF3-203ENST00000475482 SMIM28A0A1B0GU29 152 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 MEFVO15553 781 aaPredicted RBP17.01■□□□□ 0.31
CPSF3-203ENST00000475482 TADA2AO75478 443 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 TOM1L1O75674 476 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 KIF4AO95239 1232 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 MYL5Q02045 173 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 IQCB1Q15051 598 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 COBLL1Q53SF7 1204 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 ATAT1Q5SQI0 421 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 LILRA6Q6PI73 481 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 HDAC7Q8WUI4 952 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 EDAQ92838 391 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 ZBTB45Q96K62 511 aaPredicted RBP17.01■□□□□ 0.31
CPSF3-203ENST00000475482 B3GALT6Q96L58 329 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 RIPOR3Q96MK2 946 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 CCDC94Q9BW85 323 aaPredicted RBP17.01■□□□□ 0.31
CPSF3-203ENST00000475482 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
CPSF3-203ENST00000475482 DOCK8Q8NF50 2099 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 PSMA7O14818 248 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
CPSF3-203ENST00000475482 KCNE1P15382 129 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 GAP43P17677 238 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 BMP6P22004 513 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 SCP2P22307 547 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 IGFBP6P24592 240 aaPredicted RBP17■□□□□ 0.31
CPSF3-203ENST00000475482 UPP1Q16831 310 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 RTP2Q5QGT7 225 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 DCLRE1AQ6PJP8 1040 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 PIK3R5Q8WYR1 880 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 SNX27Q96L92 541 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 TOPORSQ9NS56 1045 aaPredicted RBP17■□□□□ 0.31
CPSF3-203ENST00000475482 CNTN3Q9P232 1028 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 RAPGEFL1Q9UHV5 662 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 USTQ9Y2C2 406 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 NR2E1Q9Y466 385 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 ARIH1Q9Y4X5 557 aaPredicted RBP17■□□□□ 0.31
CPSF3-203ENST00000475482 ZDBF2Q9HCK1 2354 aa17■□□□□ 0.31
CPSF3-203ENST00000475482 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 H0YCG3 227 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 GLUD1P00367 558 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 WEE2P0C1S8 567 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 CREMQ03060 361 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 SOX4Q06945 474 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms