RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ADAM32Q8TC27 787 aa15.58■□□□□ 0.08
ATG9A-220ENST00000475339 ZC3H10Q96K80 434 aaKnown RBP15.58■□□□□ 0.08
ATG9A-220ENST00000475339 ZSWIM3Q96MP5 696 aa15.58■□□□□ 0.08
ATG9A-220ENST00000475339 ASB16Q96NS5 453 aa15.58■□□□□ 0.08
ATG9A-220ENST00000475339 AVENQ9NQS1 362 aaPredicted RBP15.58■□□□□ 0.08
ATG9A-220ENST00000475339 EIF4E1BA6NMX2 242 aaKnown RBP15.57■□□□□ 0.08
ATG9A-220ENST00000475339 SLC38A8A6NNN8 435 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 ARNTLO00327 626 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 CAPNS1P04632 268 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 HMGN5P82970 282 aaKnown RBP15.57■□□□□ 0.08
ATG9A-220ENST00000475339 ST3GAL1Q11201 340 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 HSP90AA2PQ14568 343 aaPredicted RBP15.57■□□□□ 0.08
ATG9A-220ENST00000475339 PRSS36Q5K4E3 855 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 DGKKQ5KSL6 1271 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 TXNDC11Q6PKC3 985 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 SRGAP1Q7Z6B7 1085 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 FAM184AQ8NB25 1140 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 COL4A3BPQ9Y5P4 624 aa15.57■□□□□ 0.08
ATG9A-220ENST00000475339 TDRD15B5MCY1 1934 aaKnown RBP15.56■□□□□ 0.08
ATG9A-220ENST00000475339 CAVIN2O95810 425 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 FDPSP14324 419 aaKnown RBP15.56■□□□□ 0.08
ATG9A-220ENST00000475339 PTPN2P17706 415 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 KRT2P35908 639 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 KPNA1P52294 538 aaPredicted RBP15.56■□□□□ 0.08
ATG9A-220ENST00000475339 MLLT6P55198 1093 aaPredicted RBP15.56■□□□□ 0.08
ATG9A-220ENST00000475339 CREB5Q02930 508 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 PLK5Q496M5 336 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 XKR3Q5GH77 459 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 TBCKQ8TEA7 893 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 SMARCD2Q92925 531 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 CORO1BQ9BR76 489 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 GIT1Q9Y2X7 761 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 NCANO14594 1321 aa15.56■□□□□ 0.08
ATG9A-220ENST00000475339 ASCC3Q8N3C0 2202 aaKnown RBP15.56■□□□□ 0.08
ATG9A-220ENST00000475339 PCNX2A6NKB5 2137 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 WDR27A2RRH5 827 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 KIF4AO95239 1232 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 AKAP5P24588 427 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 CCR2P41597 374 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 USP11P51784 963 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 SAFBQ15424 915 aaKnown RBP eCLIP15.55■□□□□ 0.08
ATG9A-220ENST00000475339 RTL10Q7L3V2 364 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 CSGALNACT1Q8TDX6 532 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 DEPDC1BQ8WUY9 529 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 GJA10Q969M2 543 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 LENG9Q96B70 501 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 NXF3Q9H4D5 531 aaKnown RBP15.55■□□□□ 0.08
ATG9A-220ENST00000475339 TMEM9BQ9NQ34 198 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 KLK14Q9P0G3 267 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 ACACAQ13085 2346 aa15.55■□□□□ 0.08
ATG9A-220ENST00000475339 CCDC163A0A0D9SF12 145 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 M0R2N6 131 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 CDX4O14627 284 aaPredicted RBP15.54■□□□□ 0.08
ATG9A-220ENST00000475339 SFNP31947 248 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 CIITAP33076 1130 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 GRIK3Q13003 919 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 CCINQ13939 588 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 NPY5RQ15761 445 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 INF2Q27J81 1249 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 UAP1L1Q3KQV9 507 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 PKN3Q6P5Z2 889 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 C1orf228Q6PIY5 440 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 PIK3AP1Q6ZUJ8 805 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 TTC8Q8TAM2 541 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 PRPF31Q8WWY3 499 aaKnown RBP15.54■□□□□ 0.08
ATG9A-220ENST00000475339 MSANTD3Q96H12 275 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 CPB2Q96IY4 423 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 C8orf76Q96K31 380 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 DUSP15Q9H1R2 295 aaPredicted RBP15.54■□□□□ 0.08
ATG9A-220ENST00000475339 C8orf33Q9H7E9 229 aaPredicted RBP15.54■□□□□ 0.08
ATG9A-220ENST00000475339 CDY1Q9Y6F8 540 aa15.54■□□□□ 0.08
ATG9A-220ENST00000475339 BCLAF3A2AJT9 711 aaKnown RBP15.53■□□□□ 0.08
ATG9A-220ENST00000475339 CASTOR2A6NHX0 329 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 SPECC1L-ADORA2AF8WAN1 911 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 TSPAN1O60635 241 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 GAS7O60861 476 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 AKAP3O75969 853 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 ERLIN2O94905 339 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 CTHP32929 405 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 JAK3P52333 1124 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
ATG9A-220ENST00000475339 PON2Q15165 354 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 PLA2G4FQ68DD2 849 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 NOTUMQ6P988 496 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 MFSD6LQ8IWD5 586 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 OXER1Q8TDS5 423 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 TMEM143Q96AN5 459 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 TMX3Q96JJ7 454 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 MKNK1Q9BUB5 465 aa15.53■□□□□ 0.08
ATG9A-220ENST00000475339 APC2O95996 2303 aa15.52■□□□□ 0.08
ATG9A-220ENST00000475339 SPAARA0A1B0GVQ0 90 aa15.52■□□□□ 0.08
ATG9A-220ENST00000475339 MYBPHLA2RUH7 354 aa15.52■□□□□ 0.08
ATG9A-220ENST00000475339 HEPACAM2A8MVW5 462 aa15.52■□□□□ 0.08
ATG9A-220ENST00000475339 DCLK1O15075 740 aa15.52■□□□□ 0.08
ATG9A-220ENST00000475339 MSH4O15457 936 aa15.52■□□□□ 0.08
ATG9A-220ENST00000475339 CD2BP2O95400 341 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms