RNA–Protein interactions for RNA: ENST00000474937.1

NIN-209, Transcript of ninein, humanhuman

TSL 3

Gene NIN, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-209ENST00000474937 WNT16Q9UBV4 365 aa13.67□□□□□ -0.22
NIN-209ENST00000474937 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.67□□□□□ -0.22
NIN-209ENST00000474937 CITO14578 2027 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 MYH11P35749 1972 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 I3L4J1 428 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 CCL16O15467 120 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 MEFVO15553 781 aaPredicted RBP13.66□□□□□ -0.22
NIN-209ENST00000474937 CLTAP09496 248 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 SRFP11831 508 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 PLCG1P19174 1290 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 ABCD1P33897 745 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 HTR4Q13639 388 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
NIN-209ENST00000474937 KYAT1Q16773 422 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
NIN-209ENST00000474937 SIX5Q8N196 739 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 FLCNQ8NFG4 579 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 BICD1Q96G01 975 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 PARVGQ9HBI0 331 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 BLOC1S4Q9NUP1 217 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 CDH7Q9ULB5 785 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 USP34Q70CQ2 3546 aa13.66□□□□□ -0.22
NIN-209ENST00000474937 PTPRZ1P23471 2315 aaPredicted RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 DOCK6Q96HP0 2047 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 H7C4K7 107 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 TBC1D4O60343 1298 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 ABLIM3O94929 683 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 FAM13AO94988 1023 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 NPR3P17342 541 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 AOC1P19801 751 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
NIN-209ENST00000474937 LIG4P49917 911 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 GRIN1Q05586 938 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 CWF19L1Q69YN2 538 aaKnown RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 LRRC15Q8TF66 581 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 RAD54LQ92698 747 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 ATOH1Q92858 354 aaPredicted RBP13.65□□□□□ -0.22
NIN-209ENST00000474937 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 PHOX2BQ99453 314 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 RTP3Q9BQQ7 232 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 HAPLN2Q9GZV7 340 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 POLIQ9UNA4 740 aa13.65□□□□□ -0.22
NIN-209ENST00000474937 TTC26A0AVF1 554 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 HNRNPDLO14979 420 aaKnown RBP13.64□□□□□ -0.23
NIN-209ENST00000474937 PIGRP01833 764 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
NIN-209ENST00000474937 CFHP08603 1231 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 CXCL8P10145 99 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 ATF2P15336 505 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 CYP3A5P20815 502 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 DDIT3P35638 169 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 NTHL1P78549 312 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 ROR1Q01973 937 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 MCM6Q14566 821 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 PABPC1LQ4VXU2 614 aaKnown RBP13.64□□□□□ -0.23
NIN-209ENST00000474937 SEZ6Q53EL9 994 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 MTSS1LQ765P7 747 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 APPL2Q8NEU8 664 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 LARP4BQ92615 738 aaKnown RBP13.64□□□□□ -0.23
NIN-209ENST00000474937 FGF13Q92913 245 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 DNMT3BQ9UBC3 853 aaKnown RBP13.64□□□□□ -0.23
NIN-209ENST00000474937 MAFFQ9ULX9 164 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 NUMBLQ9Y6R0 609 aa13.64□□□□□ -0.23
NIN-209ENST00000474937 A0A0B4J269 797 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 KRBA1A5PL33 1030 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 H0Y858 1186 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 K7ENM7 598 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 OGTO15294 1046 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 TRAK2O60296 914 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
NIN-209ENST00000474937 ADRB2P07550 413 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 LRPAP1P30533 357 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 ELF1P32519 619 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 MCM4P33991 863 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 CTXN3Q4LDR2 81 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 TPGS2Q68CL5 300 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 TCEAL8Q8IYN2 117 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 ITFG1Q8TB96 612 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
NIN-209ENST00000474937 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 TUBGCP4Q9UGJ1 667 aa13.63□□□□□ -0.23
NIN-209ENST00000474937 FBXL5Q9UKA1 691 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms