RNA–Protein interactions for RNA: ENST00000474904.5

GPATCH4-206, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-206ENST00000474904 FAM50BQ9Y247 325 aa11.76□□□□□ -0.53
GPATCH4-206ENST00000474904 HCFC2Q9Y5Z7 792 aa11.76□□□□□ -0.53
GPATCH4-206ENST00000474904 H3BQ06 376 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 TGFB1I1O43294 461 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 XPOTO43592 962 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 B3GAT3O94766 335 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 CASP1P29466 404 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 AARSP49588 968 aaKnown RBP eCLIP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 CLCN4P51793 760 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 DPYDQ12882 1025 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SMAD4Q13485 552 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SMAD2Q15796 467 aaKnown RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SPATA1Q5VX52 437 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 PTCRAQ6ISU1 281 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SYCE2Q6PIF2 218 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 C12orf56Q8IXR9 622 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 TMEM87AQ8NBN3 555 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 C3orf58Q8NDZ4 430 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SUSD6Q92537 303 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 HPS3Q969F9 1004 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 TTPALQ9BTX7 342 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 RHOBTB2Q9BYZ6 727 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 S1PR5Q9H228 398 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 IKZF4Q9H2S9 585 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 CHMP5Q9NZZ3 219 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 CACNG4Q9UBN1 327 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 PRKAG3Q9UGI9 489 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 SCN1AP35498 2009 aa11.75□□□□□ -0.53
GPATCH4-206ENST00000474904 PODXLO00592 558 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 SYN3O14994 580 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 TEX28O15482 410 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 MBTPS2O43462 519 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 EXTL3O43909 919 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 IL18RAPO95256 599 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 ADH1AP07327 375 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 IGFBP6P24592 240 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 ANP32AP39687 249 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 ACOT2P49753 483 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 NDUFV1P49821 464 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 STK4Q13043 487 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 KCNB1Q14721 858 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 RTP2Q5QGT7 225 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 FAM171A1Q5VUB5 890 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 KIAA1841Q6NSI8 718 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 LILRA6Q6PI73 481 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 GRAMD1CQ8IYS0 662 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 C18orf25Q96B23 403 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 CBWD1Q9BRT8 395 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 GOLGA2P5Q9HBQ8 144 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 DZANK1Q9NVP4 752 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 BARX2Q9UMQ3 279 aaPredicted RBP11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 BACE2Q9Y5Z0 518 aa11.74□□□□□ -0.53
GPATCH4-206ENST00000474904 ANO9A1A5B4 782 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 M0QZQ0 153 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 PIRO00625 290 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 CSPG5O95196 566 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 PLXNA3P51805 1871 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 RBM10P98175 930 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 ITIH3Q06033 890 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 KNOP1Q1ED39 458 aaKnown RBP11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 KMT5BQ4FZB7 885 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 CYP26C1Q6V0L0 522 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 CLEC17AQ6ZS10 378 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 RTL10Q7L3V2 364 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 GPD1LQ8N335 351 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 KIAA0895Q8NCT3 520 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 CMASQ8NFW8 434 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 GOLGA5Q8TBA6 731 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 ADAMTS19Q8TE59 1207 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 RIN2Q8WYP3 895 aaPredicted RBP11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 CLSTN3Q9BQT9 956 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 PLEKHA4Q9H4M7 779 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 SLC39A2Q9NP94 309 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 AGPAT3Q9NRZ7 376 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 TUBGCP4Q9UGJ1 667 aa11.73□□□□□ -0.53
GPATCH4-206ENST00000474904 GOLGA6L4A6NEF3 574 aa11.72□□□□□ -0.53
GPATCH4-206ENST00000474904 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
GPATCH4-206ENST00000474904 PDXKO00764 312 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms