RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 NOMO2Q5JPE7 1267 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 ANKRD40Q6AI12 368 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 SLFN12LQ6IEE8 588 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TTI2Q6NXR4 508 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CD300LGQ6UXG3 332 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TMEM173Q86WV6 379 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 ZC3H3Q8IXZ2 948 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CMTR2Q8IYT2 770 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 SYCP3Q8IZU3 236 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TMEM105Q8N8V8 129 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 BCL7CQ8WUZ0 217 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 POMGNT1Q8WZA1 660 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CLP1Q92989 425 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 EEF2KMTQ96G04 330 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 CCDC34Q96HJ3 373 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 PPP1R10Q96QC0 940 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 YME1L1Q96TA2 773 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 DUSP9Q99956 384 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 ADPGKQ9BRR6 497 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TRIM6Q9C030 488 aaPredicted RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TMEM206Q9H813 350 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TYW1Q9NV66 732 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 RMND1Q9NWS8 449 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 DLL3Q9NYJ7 618 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 HSPBP1Q9NZL4 362 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 DNAJB4Q9UDY4 337 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 PARP2Q9UGN5 583 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 HOOK1Q9UJC3 728 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 AGO2Q9UKV8 859 aaKnown RBP7.61□□□□□ -1.19
LIMD1-204ENST00000474665 LRFN2Q9ULH4 789 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 EXOC7Q9UPT5 735 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 TRAF3IP3Q9Y228 551 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 INPP5FQ9Y2H2 1132 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 GIT1Q9Y2X7 761 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 INSL6Q9Y581 213 aa7.61□□□□□ -1.19
LIMD1-204ENST00000474665 PTPRJQ12913 1337 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 EXTL3O43909 919 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 AKAP3O75969 853 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 EFEMP2O95967 443 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 POMCP01189 267 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 NR3C1P04150 777 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 KCNE1P15382 129 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 PBX3P40426 434 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 CYP2J2P51589 502 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 GUCY2FP51841 1108 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 SPAG1Q07617 926 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 BTG3Q14201 252 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-204ENST00000474665 NFIL3Q16649 462 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 PTPROQ16827 1216 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 TIGD5Q53EQ6 642 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 GLRA4Q5JXX5 417 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 C1orf220Q5T0J3 134 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 CCDC183Q5T5S1 534 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 CAVIN1Q6NZI2 390 aaKnown RBP7.6□□□□□ -1.19
LIMD1-204ENST00000474665 GLB1LQ6UWU2 654 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 STXBP4Q6ZWJ1 553 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 SLC9A9Q8IVB4 645 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 EFCAB13Q8IY85 973 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 COLGALT2Q8IYK4 626 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 TRIML1Q8N9V2 468 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 CXorf38Q8TB03 319 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 C18orf25Q96B23 403 aaPredicted RBP7.6□□□□□ -1.19
LIMD1-204ENST00000474665 PGBD4Q96DM1 585 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 BORCS6Q96GS4 357 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 RIPOR3Q96MK2 946 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 ACAP3Q96P50 834 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 PAAF1Q9BRP4 392 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 FAM213AQ9BRX8 229 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 FUCA2Q9BTY2 467 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 VN1R3Q9BXE9 311 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 NRDE2Q9H7Z3 1164 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 CNTN3Q9P232 1028 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 DMXL1Q9Y485 3027 aa7.6□□□□□ -1.19
LIMD1-204ENST00000474665 DOCK6Q96HP0 2047 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 USP24Q9UPU5 2620 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 LOC730098B7Z3J9 87 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 HOXA2O43364 376 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 ITGB1P05556 798 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 GALTP07902 379 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 NFICP08651 508 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 CCNE1P24864 410 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 BMPR1AP36894 532 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 MATR3P43243 847 aaKnown RBP eCLIP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 SLC11A1P49279 550 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 STX17P56962 302 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 NLRP12P59046 1061 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 SNRPFP62306 86 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 CAMK1Q14012 370 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 SNRNP35Q16560 246 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 RSPO4Q2I0M5 234 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 EDRF1Q3B7T1 1238 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 KLHL10Q6JEL2 608 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 ARMCX5Q6P1M9 558 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 C11orf57Q6ZUT1 292 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 HS2ST1Q7LGA3 356 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 IRF2BP1Q8IU81 584 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 BRSK2Q8IWQ3 736 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 LRRC43Q8N309 656 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 GPD1LQ8N335 351 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms