RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SMIM28A0A1B0GU29 152 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 WDR27A2RRH5 827 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 CCDC169A6NNP5 214 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 K7ERI5 159 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 PODXLO00592 558 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 PTPN2P17706 415 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 SOX4Q06945 474 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-209ENST00000474647 ZNF568Q3ZCX4 644 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 TANGO2Q6ICL3 276 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 RTL10Q7L3V2 364 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 ZNF461Q8TAF7 563 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 KIFAP3Q92845 792 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 BRD9Q9H8M2 597 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 CYP4F11Q9HBI6 524 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 ZSCAN32Q9NX65 697 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 DLL3Q9NYJ7 618 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 GDE1Q9NZC3 331 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 MRPS17Q9Y2R5 130 aaKnown RBP15.36■□□□□ 0.05
CCDC78-209ENST00000474647 PHLPP2Q6ZVD8 1323 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 OBSL1O75147 1896 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 SPTBN2O15020 2390 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
CCDC78-209ENST00000474647 GNL2Q13823 731 aaKnown RBP15.35■□□□□ 0.05
CCDC78-209ENST00000474647 PDZD4Q76G19 769 aaPredicted RBP15.35■□□□□ 0.05
CCDC78-209ENST00000474647 ELSPBP1Q96BH3 223 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 NELL2Q99435 816 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 CDT1Q9H211 546 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 SLC38A7Q9NVC3 462 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 NUB1Q9Y5A7 615 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 ATG2BQ96BY7 2078 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 GREB1Q4ZG55 1949 aa15.35■□□□□ 0.05
CCDC78-209ENST00000474647 ARHGEF37A1IGU5 675 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 GRM5P41594 1212 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 RPS9P46781 194 aaKnown RBP15.34■□□□□ 0.05
CCDC78-209ENST00000474647 NEK4P51957 841 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 PEX3P56589 373 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 ADCY1Q08828 1119 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 MTAPQ13126 283 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 ECM1Q16610 540 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 PRSS36Q5K4E3 855 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 TTC38Q5R3I4 469 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 SLC8B1Q6J4K2 584 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 POTEHQ6S545 545 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 ELMOD1Q8N336 334 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 ZBTB44Q8NCP5 570 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 DNASE1L2Q92874 299 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 CLDN23Q96B33 292 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 BORCS6Q96GS4 357 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 C8orf76Q96K31 380 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 EPC1Q9H2F5 836 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 ZFP14Q9HCL3 533 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 AVENQ9NQS1 362 aaPredicted RBP15.34■□□□□ 0.05
CCDC78-209ENST00000474647 DDX19AQ9NUU7 478 aaKnown RBP15.34■□□□□ 0.05
CCDC78-209ENST00000474647 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 TNFSF13BQ9Y275 285 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 INSL5Q9Y5Q6 135 aa15.34■□□□□ 0.05
CCDC78-209ENST00000474647 EML5Q05BV3 1969 aa15.33■□□□□ 0.05
CCDC78-209ENST00000474647 H7C4K7 107 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 ABLIM3O94929 683 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 SEC24AO95486 1093 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 ATF2P15336 505 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 MUTP22033 750 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 FCARP24071 287 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 ST3GAL1Q11201 340 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 CTXN3Q4LDR2 81 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 FAM78AQ5JUQ0 283 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 ZMAT2Q96NC0 199 aaKnown RBP15.33■□□□□ 0.04
CCDC78-209ENST00000474647 ACO2Q99798 780 aaKnown RBP15.33■□□□□ 0.04
CCDC78-209ENST00000474647 TCHPQ9BT92 498 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.04
CCDC78-209ENST00000474647 MRPL4Q9BYD3 311 aaKnown RBP15.33■□□□□ 0.04
CCDC78-209ENST00000474647 PRMT8Q9NR22 394 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-209ENST00000474647 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 CDV3Q9UKY7 258 aaKnown RBP15.33■□□□□ 0.04
CCDC78-209ENST00000474647 CACNA1BQ00975 2339 aa15.33■□□□□ 0.04
CCDC78-209ENST00000474647 ZNF197O14709 1029 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 SYN3O14994 580 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 LILRB5O75023 590 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 MYL4P12829 197 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 CPB1P15086 417 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 GDI1P31150 447 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 MCM4P33991 863 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 CCR2P41597 374 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 NPTX2P47972 431 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 DMP1Q13316 513 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-209ENST00000474647 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-209ENST00000474647 NBR1Q14596 966 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 LPAL2Q16609 132 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 CYP4A22Q5TCH4 519 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 ZNF280DQ6N043 979 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 TCEAL8Q8IYN2 117 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 HS6ST3Q8IZP7 471 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 GPR161Q8N6U8 529 aaKnown RBP15.32■□□□□ 0.04
CCDC78-209ENST00000474647 SNX29Q8TEQ0 813 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 C18orf25Q96B23 403 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms