RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TMEM132AQ24JP5 1023 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 LIN9Q5TKA1 542 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 MAATS1Q7Z4T9 603 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 ZNF564Q8TBZ8 553 aaPredicted RBP23.29■■□□□ 1.32
CCM2-206ENST00000474617 NIF3L1Q9GZT8 377 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 ASB7Q9H672 318 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 RPF1Q9H9Y2 349 aaKnown RBP23.29■■□□□ 1.32
CCM2-206ENST00000474617 GDF3Q9NR23 364 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 COG5Q9UP83 839 aa23.29■■□□□ 1.32
CCM2-206ENST00000474617 NOC2LQ9Y3T9 749 aaKnown RBP23.29■■□□□ 1.32
CCM2-206ENST00000474617 LSM8O95777 96 aaKnown RBP23.28■■□□□ 1.32
CCM2-206ENST00000474617 MMP3P08254 477 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 TMEM191BP0C7N4 346 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 CTNNA2P26232 953 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 ADCYAP1R1P41586 468 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 NSFP46459 744 aaKnown RBP23.28■■□□□ 1.32
CCM2-206ENST00000474617 CLCN3P51790 818 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 PAK2Q13177 524 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 ZBTB41Q5SVQ8 909 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 MTHFD1LQ6UB35 978 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 ZBTB33Q86T24 672 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 AENQ8WTP8 325 aaKnown RBP23.28■■□□□ 1.32
CCM2-206ENST00000474617 CAVIN3Q969G5 261 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 RUNDC3BQ96NL0 473 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 PCDHB4Q9Y5E5 795 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 UTRNP46939 3433 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 KRIT1O00522 736 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 HARSP12081 509 aaKnown RBP23.28■■□□□ 1.32
CCM2-206ENST00000474617 ZNF132P52740 706 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 CUL1Q13616 776 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 CD302Q8IX05 232 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 UBR7Q8N806 425 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 OR6J1Q8NGC5 347 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 OR5B17Q8NGF7 314 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 NUP85Q9BW27 656 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 ZNF518BQ9C0D4 1074 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 IFT122Q9HBG6 1241 aa23.28■■□□□ 1.32
CCM2-206ENST00000474617 MRPL47Q9HD33 250 aaKnown RBP23.28■■□□□ 1.32
CCM2-206ENST00000474617 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.28■■□□□ 1.327e-6■□□□□ 10.1
CCM2-206ENST00000474617 GNA15P30679 374 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 AARSP49588 968 aaKnown RBP eCLIP23.27■■□□□ 1.32
CCM2-206ENST00000474617 WNT7BP56706 349 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 PPFIA1Q13136 1202 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 HSP90B2PQ58FF3 399 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 LMBRD2Q68DH5 695 aaPredicted RBP23.27■■□□□ 1.32
CCM2-206ENST00000474617 TTC39CQ8N584 583 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 RBBP8NLQ8NC74 664 aaPredicted RBP23.27■■□□□ 1.32
CCM2-206ENST00000474617 ARID3AQ99856 593 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 PTPN18Q99952 460 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 ZSWIM1Q9BR11 485 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 CDT1Q9H211 546 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 RRAGCQ9HB90 399 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 APOBEC3GQ9HC16 384 aaKnown RBP23.27■■□□□ 1.32
CCM2-206ENST00000474617 RNF216Q9NWF9 866 aaPredicted RBP23.27■■□□□ 1.32
CCM2-206ENST00000474617 CNOT8Q9UFF9 292 aaKnown RBP23.27■■□□□ 1.32
CCM2-206ENST00000474617 AKT3Q9Y243 479 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 SCINQ9Y6U3 715 aa23.27■■□□□ 1.32
CCM2-206ENST00000474617 ATICP31939 592 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 DNA2P51530 1060 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 C1QBPQ07021 282 aaKnown RBP23.26■■□□□ 1.31
CCM2-206ENST00000474617 MAP2K5Q13163 448 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 MORN1Q5T089 497 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 PHF13Q86YI8 300 aaPredicted RBP23.26■■□□□ 1.31
CCM2-206ENST00000474617 MCOLN2Q8IZK6 566 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 WHAMMQ8TF30 809 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 TRAPPC12Q8WVT3 735 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 KRT12Q99456 494 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 DMGDHQ9UI17 866 aaKnown RBP23.26■■□□□ 1.31
CCM2-206ENST00000474617 Q9Y3F1 56 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 NUB1Q9Y5A7 615 aa23.26■■□□□ 1.31
CCM2-206ENST00000474617 HEXIM1O94992 359 aaKnown RBP23.25■■□□□ 1.31
CCM2-206ENST00000474617 SMPD1P17405 629 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 CTNNA1P35221 906 aaKnown RBP23.25■■□□□ 1.31
CCM2-206ENST00000474617 TNFSF9P41273 254 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 GRIK4Q16099 956 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 TMEM270Q6UE05 265 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 DNAAF5Q86Y56 855 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 EFCAB13Q8IY85 973 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 RNPC3Q96LT9 517 aaKnown RBP23.25■■□□□ 1.31
CCM2-206ENST00000474617 MTMR12Q9C0I1 747 aa23.25■■□□□ 1.31
CCM2-206ENST00000474617 A6NJR5 290 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 P4HA1P13674 534 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 MKRN3Q13064 507 aaKnown RBP23.24■■□□□ 1.31
CCM2-206ENST00000474617 AMHR2Q16671 573 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 DCAF4L1Q3SXM0 396 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 SEL1L2Q5TEA6 688 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 OLFML2BQ68BL8 750 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 CD101Q93033 1021 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 ADPGKQ9BRR6 497 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 GOLPH3Q9H4A6 298 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 VRTNQ9H8Y1 702 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 EHD2Q9NZN4 543 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 ZHX1Q9UKY1 873 aaPredicted RBP23.24■■□□□ 1.31
CCM2-206ENST00000474617 NRCAMQ92823 1304 aa23.24■■□□□ 1.31
CCM2-206ENST00000474617 TTLL13PA6NNM8 815 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 GBP1P32455 592 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 TNNT3P45378 269 aaPredicted RBP23.23■■□□□ 1.31
CCM2-206ENST00000474617 HUNKP57058 714 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 IGBP1P78318 339 aa23.23■■□□□ 1.31
CCM2-206ENST00000474617 ZNF699Q32M78 642 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms