RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 ELAVL2Q12926 359 aaKnown RBP17.42■□□□□ 0.38
ITGB1-210ENST00000474568 PSMD5Q16401 504 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 KYAT1Q16773 422 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 CES5AQ6NT32 575 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 ZSWIM2Q8NEG5 633 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 SAAL1Q96ER3 474 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 DDX27Q96GQ7 796 aaKnown RBP17.42■□□□□ 0.38
ITGB1-210ENST00000474568 ADAM7Q9H2U9 754 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 CPSF3Q9UKF6 684 aaKnown RBP17.42■□□□□ 0.38
ITGB1-210ENST00000474568 NUB1Q9Y5A7 615 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 ATP6V1DQ9Y5K8 247 aa17.42■□□□□ 0.38
ITGB1-210ENST00000474568 ADAM12O43184 909 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 TGM5O43548 720 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 ADSSP30520 456 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 CUL4BQ13620 913 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 JADE1Q6IE81 842 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 SLFN12LQ6IEE8 588 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.41■□□□□ 0.38
ITGB1-210ENST00000474568 CEP57L1Q8IYX8 460 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 LNX1Q8TBB1 728 aaPredicted RBP17.41■□□□□ 0.38
ITGB1-210ENST00000474568 PIK3R5Q8WYR1 880 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 POP1Q99575 1024 aaKnown RBP17.41■□□□□ 0.38
ITGB1-210ENST00000474568 C7orf25Q9BPX7 421 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 PHF7Q9BWX1 381 aaPredicted RBP17.41■□□□□ 0.38
ITGB1-210ENST00000474568 PCIF1Q9H4Z3 704 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 EPHX3Q9H6B9 360 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 PLEKHA5Q9HAU0 1116 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
ITGB1-210ENST00000474568 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.41■□□□□ 0.38
ITGB1-210ENST00000474568 GOLGA8IPA6NC78 632 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 C19orf67A6NJJ6 358 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 GOLGA8JA6NMD2 632 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 NFICP08651 508 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 FGFR3P22607 806 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 MCM4P33991 863 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 CREMQ03060 361 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 ITIH3Q06033 890 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 CLSTN3Q9BQT9 956 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 FAM213AQ9BRX8 229 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 POMKQ9H5K3 350 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 SFXN1Q9H9B4 322 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 MAGEF1Q9HAY2 307 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 FNIP2Q9P278 1114 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 UBQLN1Q9UMX0 589 aaKnown RBP17.4■□□□□ 0.38
ITGB1-210ENST00000474568 STYXL1Q9Y6J8 313 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 MUC3AQ02505 3323 aa17.4■□□□□ 0.38
ITGB1-210ENST00000474568 PPEF2O14830 753 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 TRAPPC3O43617 180 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 ACTN4O43707 911 aaKnown RBP17.39■□□□□ 0.37
ITGB1-210ENST00000474568 RFPL2O75678 378 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 CMA1P23946 247 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 RPL9P32969 192 aaKnown RBP17.39■□□□□ 0.37
ITGB1-210ENST00000474568 ALCAMQ13740 583 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 POSTNQ15063 836 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 FAM26FQ5R3K3 315 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 RIPOR3Q96MK2 946 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
ITGB1-210ENST00000474568 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 OR1D2P34982 312 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 MTHFRP42898 656 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 NDUFA8P51970 172 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 ARPP19P56211 112 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 TMEM132DQ14C87 1099 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 ZBTB6Q15916 424 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 ATAT1Q5SQI0 421 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 CRELD2Q6UXH1 353 aaPredicted RBP17.38■□□□□ 0.37
ITGB1-210ENST00000474568 RSPO2Q6UXX9 243 aaPredicted RBP17.38■□□□□ 0.37
ITGB1-210ENST00000474568 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 UNC13DQ70J99 1090 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 FSIP1Q8NA03 581 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 KREMEN2Q8NCW0 462 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 BEST2Q8NFU1 509 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 PYM1Q9BRP8 204 aaKnown RBP17.38■□□□□ 0.37
ITGB1-210ENST00000474568 SCAND2PQ9GZW5 306 aaPredicted RBP17.38■□□□□ 0.37
ITGB1-210ENST00000474568 TMEM206Q9H813 350 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 SLC39A2Q9NP94 309 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 CDY1Q9Y6F8 540 aa17.38■□□□□ 0.37
ITGB1-210ENST00000474568 CCDC195A0A1B0GUA6 201 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 LOC730098B7Z3J9 87 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 XPOTO43592 962 aaKnown RBP17.37■□□□□ 0.37
ITGB1-210ENST00000474568 LRPAP1P30533 357 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 WNT7BP56706 349 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 VARS2Q5ST30 1063 aaKnown RBP17.37■□□□□ 0.37
ITGB1-210ENST00000474568 CNNM4Q6P4Q7 775 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 GPR149Q86SP6 731 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 RNF135Q8IUD6 432 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 CD302Q8IX05 232 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 GPR65Q8IYL9 337 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 FAM84AQ96KN4 292 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 GOLPH3LQ9H4A5 285 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 MTRRQ9UBK8 725 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 MUTYHQ9UIF7 546 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 HPSEQ9Y251 543 aa17.37■□□□□ 0.37
ITGB1-210ENST00000474568 TIMM13Q9Y5L4 95 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-210ENST00000474568 C5orf42Q9H799 3197 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 FAM86C2PA6NEL3 165 aa17.36■□□□□ 0.37
ITGB1-210ENST00000474568 ADRB2P07550 413 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms