RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 AOC3Q16853 763 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ACCSLQ4AC99 568 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 SGO2Q562F6 1265 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 TMEM31Q5JXX7 168 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 KRT39Q6A163 491 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC62Q6P9F0 684 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 TRIM72Q6ZMU5 477 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 RNF207Q6ZRF8 634 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CENPUQ71F23 418 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 USP17L1Q7RTZ2 530 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF384Q8TF68 577 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 BORCS6Q96GS4 357 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF570Q96NI8 536 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 NUDCD1Q96RS6 583 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CDX2Q99626 313 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 PAIP2Q9BPZ3 127 aaKnown RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 SIKE1Q9BRV8 207 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CENPKQ9BS16 269 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 WDR11Q9BZH6 1224 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 TRIM31Q9BZY9 425 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 TRIM4Q9C037 500 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 INTS2Q9H0H0 1204 aaKnown RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CDC42EP4Q9H3Q1 356 aaKnown RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 SEMA4AQ9H3S1 761 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ZHX3Q9H4I2 956 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 FAM96AQ9H5X1 160 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 KIF9Q9HAQ2 790 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 DMAP1Q9NPF5 467 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 AVENQ9NQS1 362 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 RGL1Q9NZL6 768 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ANAPC5Q9UJX4 755 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 PPP1R9AQ9ULJ8 1098 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 EXOC7Q9UPT5 735 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ASTN1O14525 1302 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 FOCADQ5VW36 1801 aa8.52□□□□□ -1.04
CCDC93-208ENST00000474546 GSTTP1A0A1W2PQM5 241 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 DCDC2CA8MYV0 355 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 MAP3K7O43318 606 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 DNAJC6O75061 913 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 SHBGP04278 402 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 HLA-DOAP06340 250 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 CYP2D6P10635 497 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 PRDX5P30044 214 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 IFNAR2P48551 515 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 CCNHP51946 323 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 RAD23BP54727 409 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 IFI35P80217 286 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 CDR2Q01850 454 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 BFSP1Q12934 665 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 MAP7Q14244 749 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 CTTNQ14247 550 aaKnown RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 KRT72Q14CN4 511 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 CCNG2Q16589 344 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 DBN1Q16643 649 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 DRICH1Q6PGQ1 229 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 RHBDF2Q6PJF5 856 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ANKS1BQ7Z6G8 1248 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 UBE2Q1Q7Z7E8 422 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 SFR1Q86XK3 245 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ALDH16A1Q8IZ83 802 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ZCCHC9Q8N567 271 aaKnown RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 FITM2Q8N6M3 262 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 LNX1Q8TBB1 728 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 EPS8L3Q8TE67 593 aaKnown RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 SH3RF3Q8TEJ3 882 aaPredicted RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 TGFBRAP1Q8WUH2 860 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 CD101Q93033 1021 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 VCPIP1Q96JH7 1222 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 NACC1Q96RE7 527 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 REEP2Q9BRK0 252 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 SYNCQ9H7C4 482 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 MRPL47Q9HD33 250 aaKnown RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 SEPT11Q9NVA2 429 aaKnown RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 DMAC2Q9NW81 257 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ANKFY1Q9P2R3 1169 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 POLIQ9UNA4 740 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 SORCS3Q9UPU3 1222 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 STK38LQ9Y2H1 464 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 MTO1Q9Y2Z2 717 aaKnown RBP8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ASB3Q9Y575 518 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 ZFHX4Q86UP3 3567 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 GAKO14976 1311 aa8.52□□□□□ -1.05
CCDC93-208ENST00000474546 C5orf42Q9H799 3197 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 USP34Q70CQ2 3546 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 IGKV6D-41A0A0C4DH26 115 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 POTEB3A0JP26 581 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 RASA4BC9J798 803 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 E9PMD0 336 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 MPHOSPH10O00566 681 aaKnown RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 RASA4O43374 803 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SPAG6O75602 509 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 KRT37O76014 449 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 FTLP02792 175 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 TPBGLP0DKB5 382 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 KRT15P19012 456 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms