RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 BMP2KQ9NSY1 1161 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 GMIPQ9P107 970 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 VPS18Q9P253 973 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MYO1AQ9UBC5 1043 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FBXO40Q9UH90 709 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ASIC3Q9UHC3 531 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ZNF148Q9UQR1 794 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FRMPD2Q68DX3 1309 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 FAM237AA0A1B0GTK4 181 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NCF1BA6NI72 391 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 NCF1CA8MVU1 366 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 TP73O15350 636 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TRAPPC3O43617 180 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CKMT1AP12532 417 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 DHPSP49366 369 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 NKX3-2P78367 333 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PRKCZQ05513 592 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KLC1Q07866 573 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 AANATQ16613 207 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NDUFA5Q16718 116 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KYAT1Q16773 422 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ARL13BQ3SXY8 428 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 USP39Q53GS9 565 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 TJAP1Q5JTD0 557 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FOXR1Q6PIV2 292 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 C3orf62Q6ZUJ4 267 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SPATC1Q76KD6 591 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SGMS1Q86VZ5 419 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NSUN7Q8NE18 718 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 LINS1Q8NG48 757 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ZNF671Q8TAW3 534 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 STARD8Q92502 1023 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SLC9A6Q92581 669 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 LPPQ93052 612 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CCDC127Q96BQ5 260 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MFSD3Q96ES6 412 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CABS1Q96KC9 395 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 EXOC2Q96KP1 924 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TMEM68Q96MH6 324 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CDK5RAP1Q96SZ6 601 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 FAM83CQ9BQN1 747 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TRIM62Q9BVG3 475 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PINK1Q9BXM7 581 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ZNF341Q9BYN7 854 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ADAM33Q9BZ11 813 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NDEL1Q9GZM8 345 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SERINC1Q9NRX5 453 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CCDC87Q9NVE4 849 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 THAP1Q9NVV9 213 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MIS18AQ9NYP9 233 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 OR6C2Q9NZP2 312 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 REV1Q9UBZ9 1251 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CDC23Q9UJX2 597 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 DSEQ9UL01 958 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FAM32AQ9Y421 112 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 C1orf232A0A0U1RR37 186 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 CAMTA2O94983 1202 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 S100A9P06702 114 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 SNRNP70P08621 437 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 VEGFAP15692 232 aaPredicted RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 CCNA2P20248 432 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 DSG3P32926 999 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 WNT5AP41221 380 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 SERPINB8P50452 374 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 PDE1BQ01064 536 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 PTGDRQ13258 359 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 DYNC1I2Q13409 638 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 ADAM15Q13444 863 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 UBE3CQ15386 1083 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 LARP1Q6PKG0 1096 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 MARK2Q7KZI7 788 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 DHX32Q7L7V1 743 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 AKAP14Q86UN6 197 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 CLVS1Q8IUQ0 354 aaPredicted RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 C12orf56Q8IXR9 622 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 SLFN12Q8IYM2 578 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 OR9A1PQ8NGU1 263 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 FAM200AQ8TCP9 573 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 TSPEARQ8WU66 669 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 NINJ1Q92982 152 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 METTL2AQ96IZ6 378 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 ART5Q96L15 291 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 CCDC42Q96M95 316 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 SDF4Q9BRK5 362 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 CDK19Q9BWU1 502 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 FRMD8P1Q9BZ68 369 aaPredicted RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 STN1Q9H668 368 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 IFT22Q9H7X7 185 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 TBCCD1Q9NVR7 557 aa3.71□□□□□ -1.81
UBR3-208ENST00000474426 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.71□□□□□ -1.81
UBR3-208ENST00000474426 LRRIQ4A6NIV6 560 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 LRRIQ3A6PVS8 624 aaPredicted RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 ERVV-2B6SEH9 535 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 IFNB1P01574 187 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 TKTP29401 623 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 IL13P35225 146 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 IREB2P48200 963 aaKnown RBP3.71□□□□□ -1.82
UBR3-208ENST00000474426 ADCY7P51828 1080 aa3.71□□□□□ -1.82
UBR3-208ENST00000474426 NR1H2P55055 460 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms