RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 K7ENM7 598 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 FAM189A1O60320 539 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 TBC1D4O60343 1298 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 CXCL8P10145 99 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 FSHRP23945 695 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 MRPL58Q14197 206 aaKnown RBP17.23■□□□□ 0.35
CDPF1-205ENST00000474256 KYAT1Q16773 422 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 VARS2Q5ST30 1063 aaKnown RBP17.23■□□□□ 0.35
CDPF1-205ENST00000474256 USP49Q70CQ1 688 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 ALYREFQ86V81 257 aaKnown RBP17.23■□□□□ 0.35
CDPF1-205ENST00000474256 SLC44A3Q8N4M1 653 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 BICD1Q96G01 975 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 EPSTI1Q96J88 318 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 FBXO2Q9UK22 296 aaPredicted RBP17.23■□□□□ 0.35
CDPF1-205ENST00000474256 NUB1Q9Y5A7 615 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 SRPRBQ9Y5M8 271 aaKnown RBP17.23■□□□□ 0.35
CDPF1-205ENST00000474256 ZFP37Q9Y6Q3 630 aaPredicted RBP17.23■□□□□ 0.35
CDPF1-205ENST00000474256 MYO10Q9HD67 2058 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 PIEZO1Q92508 2521 aa17.23■□□□□ 0.35
CDPF1-205ENST00000474256 ANHXE9PGG2 379 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 HNRNPDLO14979 420 aaKnown RBP17.22■□□□□ 0.35
CDPF1-205ENST00000474256 CCL16O15467 120 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 NARSO43776 548 aaKnown RBP17.22■□□□□ 0.35
CDPF1-205ENST00000474256 XYLBO75191 536 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 ABLIM3O94929 683 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
CDPF1-205ENST00000474256 ADRB2P07550 413 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 MARCKSP29966 332 aaPredicted RBP17.22■□□□□ 0.35
CDPF1-205ENST00000474256 TNFSF9P41273 254 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 MATR3P43243 847 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDPF1-205ENST00000474256 LIG4P49917 911 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 NTHL1P78549 312 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 GTF2BQ00403 316 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 ZBTB6Q15916 424 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
CDPF1-205ENST00000474256 FAM173BQ6P4H8 233 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 TMEM105Q8N8V8 129 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 ZNF461Q8TAF7 563 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 SUSD3Q96L08 255 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 TUBGCP4Q9UGJ1 667 aa17.22■□□□□ 0.35
CDPF1-205ENST00000474256 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 A0A0B4J269 797 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 H7C4K7 107 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
CDPF1-205ENST00000474256 NPR3P17342 541 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 CYP3A5P20815 502 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 LRPAP1P30533 357 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 ABCD1P33897 745 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 MRE11P49959 708 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 CLCN5P51795 746 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 ROR1Q01973 937 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 HTR4Q13639 388 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 CWF19L1Q69YN2 538 aaKnown RBP17.21■□□□□ 0.35
CDPF1-205ENST00000474256 SLC39A4Q6P5W5 647 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 MAP4K3Q8IVH8 894 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 WNT16Q9UBV4 365 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 CDH7Q9ULB5 785 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 MTMR6Q9Y217 621 aa17.21■□□□□ 0.35
CDPF1-205ENST00000474256 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.21■□□□□ 0.35
CDPF1-205ENST00000474256 MORC2Q9Y6X9 1032 aaPredicted RBP17.21■□□□□ 0.35
CDPF1-205ENST00000474256 KMT2EQ8IZD2 1858 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 MTCL1Q9Y4B5 1905 aaKnown RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 WDR27A2RRH5 827 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 OGTO15294 1046 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 SRFP11831 508 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 NMT1P30419 496 aaKnown RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 MCM4P33991 863 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 PPP2R3AQ06190 1150 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 SPAG1Q07617 926 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 ZBTB41Q5SVQ8 909 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 DDX12PQ92771 950 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 FGF13Q92913 245 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 KIF12Q96FN5 646 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 CLIC6Q96NY7 704 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 TSPAN18Q96SJ8 248 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 PHOX2BQ99453 314 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 DNMT3BQ9UBC3 853 aaKnown RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 STK17AQ9UEE5 414 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 FBXL21Q9UKT6 434 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 UBQLN1Q9UMX0 589 aaKnown RBP17.2■□□□□ 0.34
CDPF1-205ENST00000474256 POLIQ9UNA4 740 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 NUMBLQ9Y6R0 609 aa17.2■□□□□ 0.34
CDPF1-205ENST00000474256 LACTBL1A8MY62 500 aa17.19■□□□□ 0.34
CDPF1-205ENST00000474256 M0QZQ0 153 aa17.19■□□□□ 0.34
CDPF1-205ENST00000474256 ATF2P15336 505 aa17.19■□□□□ 0.34
CDPF1-205ENST00000474256 CEBPZQ03701 1054 aaKnown RBP17.19■□□□□ 0.34
CDPF1-205ENST00000474256 SIX5Q8N196 739 aa17.19■□□□□ 0.34
CDPF1-205ENST00000474256 TMEM130Q8N3G9 435 aa17.19■□□□□ 0.34
CDPF1-205ENST00000474256 KRI1Q8N9T8 703 aaKnown RBP17.19■□□□□ 0.34
CDPF1-205ENST00000474256 APPL2Q8NEU8 664 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms