RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RFPL2O75678 378 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PPP1R37O75864 691 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PAPLNO95428 1278 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 ADRB2P07550 413 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 IDEP14735 1019 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
CKS1B-206ENST00000474215 OR1D2P34982 312 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PPP2R3AQ06190 1150 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 SPAG1Q07617 926 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 RAB33AQ14088 237 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 ENOX2Q16206 610 aaKnown RBP12.18□□□□□ -0.46
CKS1B-206ENST00000474215 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 AXDND1Q5T1B0 1012 aaPredicted RBP12.18□□□□□ -0.46
CKS1B-206ENST00000474215 SHC4Q6S5L8 630 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 ANKS3Q6ZW76 656 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 CD302Q8IX05 232 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 IQUBQ8NA54 791 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 RPF1Q9H9Y2 349 aaKnown RBP12.18□□□□□ -0.46
CKS1B-206ENST00000474215 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PANK4Q9NVE7 773 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 ZDHHC7Q9NXF8 308 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 TBC1D7Q9P0N9 293 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 MTRRQ9UBK8 725 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
CKS1B-206ENST00000474215 NUB1Q9Y5A7 615 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
CKS1B-206ENST00000474215 BACE2Q9Y5Z0 518 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
CKS1B-206ENST00000474215 FRMD3A2A2Y4 597 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 TISP43B9A030 160 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ZMYND10O75800 440 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 CYP3A5P20815 502 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ME1P48163 572 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ZXDAP98168 799 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 POSTNQ15063 836 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 E2F4Q16254 413 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 PTPN21Q16825 1174 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ADALQ6DHV7 355 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 RSPO2Q6UXX9 243 aaPredicted RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 CCDC149Q6ZUS6 474 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 OTOP3Q7RTS5 596 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 CCDC65Q8IXS2 484 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ZDHHC14Q8IZN3 488 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 TDRD5Q8NAT2 981 aaKnown RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 SMG7Q92540 1137 aaKnown RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 STAMQ92783 540 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ZNF707Q96C28 371 aaPredicted RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ACSF2Q96CM8 615 aaPredicted RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 TNMDQ9H2S6 317 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 LIMD1Q9UGP4 676 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 RCOR1Q9UKL0 485 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 AGO2Q9UKV8 859 aaKnown RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 UBQLN1Q9UMX0 589 aaKnown RBP12.17□□□□□ -0.46
CKS1B-206ENST00000474215 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 EXOC7Q9UPT5 735 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 MYH11P35749 1972 aa12.17□□□□□ -0.46
CKS1B-206ENST00000474215 SYN3O14994 580 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 XPOTO43592 962 aaKnown RBP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 GCNT3O95395 438 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 HNRNPA1P09651 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 ADSSP30520 456 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 LRPAP1P30533 357 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 MCM4P33991 863 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 ACOT2P49753 483 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 AMPD3Q01432 767 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 DNM1Q05193 864 aaKnown RBP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 KCNA1Q09470 495 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 ALCAMQ13740 583 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 L1TD1Q5T7N2 865 aaKnown RBP12.16□□□□□ -0.46
CKS1B-206ENST00000474215 LIN9Q5TKA1 542 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 TRIM67Q6ZTA4 783 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 DHX58Q96C10 678 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 IKZF4Q9H2S9 585 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 ASB7Q9H672 318 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 PIDD1Q9HB75 910 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 FBXW11Q9UKB1 542 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 DERAQ9Y315 318 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 CDY1Q9Y6F8 540 aa12.16□□□□□ -0.46
CKS1B-206ENST00000474215 H7C4K7 107 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 TBC1D4O60343 1298 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 CASP5P51878 434 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 PPM1LQ5SGD2 360 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 SPATA1Q5VX52 437 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 JADE1Q6IE81 842 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms