RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SMRP1Q8NCR6 262 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 CCDC47Q96A33 483 aaKnown RBP15.46■□□□□ 0.06
VAMP4-203ENST00000474047 FAM213AQ9BRX8 229 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 FGFBP2Q9BYJ0 223 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 EXOC1Q9NV70 894 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 DPP7Q9UHL4 492 aa15.46■□□□□ 0.06
VAMP4-203ENST00000474047 TNFRSF10AO00220 468 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 GLUD1P00367 558 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 MCM4P33991 863 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 SMAD2Q15796 467 aaKnown RBP15.45■□□□□ 0.06
VAMP4-203ENST00000474047 RTP2Q5QGT7 225 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 ARMCX5Q6P1M9 558 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.45■□□□□ 0.06
VAMP4-203ENST00000474047 PALB2Q86YC2 1186 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 GPR65Q8IYL9 337 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 SLC22A17Q8WUG5 538 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 HPSEQ9Y251 543 aa15.45■□□□□ 0.06
VAMP4-203ENST00000474047 USP15Q9Y4E8 981 aaPredicted RBP15.45■□□□□ 0.06
VAMP4-203ENST00000474047 UNC80Q8N2C7 3258 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 I3L4J1 428 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 EIF3DO15371 548 aaKnown RBP eCLIP15.44■□□□□ 0.06
VAMP4-203ENST00000474047 MEFVO15553 781 aaPredicted RBP15.44■□□□□ 0.06
VAMP4-203ENST00000474047 FAM189A1O60320 539 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 RPL17P18621 184 aaKnown RBP15.44■□□□□ 0.06
VAMP4-203ENST00000474047 GARTP22102 1010 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 CLCN4P51793 760 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 TMEM132DQ14C87 1099 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 PSMD5Q16401 504 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 RARS2Q5T160 578 aaKnown RBP15.44■□□□□ 0.06
VAMP4-203ENST00000474047 JADE1Q6IE81 842 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 SAAL1Q96ER3 474 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 FBXL18Q96ME1 805 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 POP1Q99575 1024 aaKnown RBP15.44■□□□□ 0.06
VAMP4-203ENST00000474047 PCIF1Q9H4Z3 704 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 ASB7Q9H672 318 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 RXFP1Q9HBX9 757 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 SLC39A2Q9NP94 309 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 FNIP2Q9P278 1114 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
VAMP4-203ENST00000474047 IL18RAPO95256 599 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 MYL1P05976 194 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 CYP3A5P20815 502 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 ADSSP30520 456 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 BRCC3P46736 316 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 ITIH3Q06033 890 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 SYCE2Q6PIF2 218 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 NELFCDQ8IXH7 590 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 C12orf76Q8N812 135 aaPredicted RBP15.43■□□□□ 0.06
VAMP4-203ENST00000474047 GLIS3Q8NEA6 775 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 PIK3R5Q8WYR1 880 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 GOLGA8IPA6NC78 632 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 GOLGA8JA6NMD2 632 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 KIAA0391O15091 583 aaKnown RBP15.43■□□□□ 0.06
VAMP4-203ENST00000474047 ZNF202O95125 648 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 SPATA31D3P0C874 917 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 FGFR3P22607 806 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 TKTP29401 623 aaKnown RBP15.43■□□□□ 0.06
VAMP4-203ENST00000474047 POU5F1Q01860 360 aaKnown RBP15.43■□□□□ 0.06
VAMP4-203ENST00000474047 PSMD2Q13200 908 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 SPATA31D4Q6ZUB0 917 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 ANKS3Q6ZW76 656 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 C3orf58Q8NDZ4 430 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 ZNF507Q8TCN5 953 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 RIPOR3Q96MK2 946 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 S1PR5Q9H228 398 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 SFXN1Q9H9B4 322 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 MAN1C1Q9NR34 630 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
VAMP4-203ENST00000474047 DERAQ9Y315 318 aa15.43■□□□□ 0.06
VAMP4-203ENST00000474047 UBE4BO95155 1302 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 A0A0C4DFX4 3053 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 FAM237AA0A1B0GTK4 181 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 EXTL3O43909 919 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 ADRB2P07550 413 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 NFICP08651 508 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 IGFBP6P24592 240 aaPredicted RBP15.42■□□□□ 0.06
VAMP4-203ENST00000474047 LRPAP1P30533 357 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 CBX2Q14781 532 aaPredicted RBP15.42■□□□□ 0.06
VAMP4-203ENST00000474047 ZBTB6Q15916 424 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 KMT5BQ4FZB7 885 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 ATAT1Q5SQI0 421 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 KANK3Q6NY19 840 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 KRBA2Q6ZNG9 492 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 ADHFE1Q8IWW8 467 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 GJD3Q8N144 294 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 GPD1LQ8N335 351 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 LNX1Q8TBB1 728 aaPredicted RBP15.42■□□□□ 0.06
VAMP4-203ENST00000474047 CBWD1Q9BRT8 395 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 ADAM7Q9H2U9 754 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 GOLPH3LQ9H4A5 285 aa15.42■□□□□ 0.06
VAMP4-203ENST00000474047 RBAKQ9NYW8 714 aaPredicted RBP15.42■□□□□ 0.06
VAMP4-203ENST00000474047 H7C4K7 107 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 MTHFRP42898 656 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 SPATA1Q5VX52 437 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 CD300LGQ6UXG3 332 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 CRELD2Q6UXH1 353 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms