RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CACNA1IQ9P0X4 2223 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 K7ENM7 598 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 ABLIM1O14639 778 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 PRRG1O14668 218 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 CLDN3O15551 220 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 TOM1L1O75674 476 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 FAM13AO94988 1023 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 KRT18P05783 430 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 CXCL8P10145 99 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 MAPTP10636 758 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 MCM2P49736 904 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 GRIN1Q05586 938 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 HTR4Q13639 388 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 MCM6Q14566 821 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 TMEM119Q4V9L6 283 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 ARSHQ5FYA8 562 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 ARL6IP4Q66PJ3 421 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 MYCT1Q8N699 235 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 FGF13Q92913 245 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 FGF14Q92915 247 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 NXPE3Q969Y0 559 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 RTP3Q9BQQ7 232 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 REEP2Q9BRK0 252 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 LARSQ9P2J5 1176 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 DNMT3BQ9UBC3 853 aaKnown RBP13.05□□□□□ -0.32
SMPD4-217ENST00000473720 WNT16Q9UBV4 365 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 TUBGCP4Q9UGJ1 667 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
SMPD4-217ENST00000473720 WDR27A2RRH5 827 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 MEFVO15553 781 aaPredicted RBP13.04□□□□□ -0.32
SMPD4-217ENST00000473720 LRG1P02750 347 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 DCNP07585 359 aaKnown RBP13.04□□□□□ -0.32
SMPD4-217ENST00000473720 KCNE1P15382 129 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 PLCG1P19174 1290 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 HOXA9P31269 272 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 TNFSF9P41273 254 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 LIG4P49917 911 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 NUBP1P53384 320 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 ROR1Q01973 937 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
SMPD4-217ENST00000473720 UVSSAQ2YD98 709 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 CTXN3Q4LDR2 81 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 HAUS6Q7Z4H7 955 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 MCRS1Q96EZ8 462 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 TBC1D32Q96NH3 1257 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 HAPLN2Q9GZV7 340 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 TBC1D17Q9HA65 648 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 CYP4F11Q9HBI6 524 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 KCNG1Q9UIX4 513 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
SMPD4-217ENST00000473720 ANHXE9PGG2 379 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 H7C4K7 107 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 HNRNPDLO14979 420 aaKnown RBP13.03□□□□□ -0.32
SMPD4-217ENST00000473720 PAPLNO95428 1278 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 RHOP08100 348 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 CPB1P15086 417 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
SMPD4-217ENST00000473720 GUCY2FP51841 1108 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 NCKAP1LP55160 1127 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 GPC5P78333 572 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 ANGPT1Q15389 498 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 MTSS1LQ765P7 747 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 DTWD2Q8NBA8 298 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 AK8Q96MA6 479 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 CORO1BQ9BR76 489 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 ARHGEF3Q9NR81 526 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 KCND2Q9NZV8 630 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 FBXL5Q9UKA1 691 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
SMPD4-217ENST00000473720 TIMM13Q9Y5L4 95 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-217ENST00000473720 OBSL1O75147 1896 aa13.03□□□□□ -0.32
SMPD4-217ENST00000473720 NUP210Q8TEM1 1887 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-217ENST00000473720 USP34Q70CQ2 3546 aa13.02□□□□□ -0.32
SMPD4-217ENST00000473720 PIEZO1Q92508 2521 aa13.02□□□□□ -0.32
SMPD4-217ENST00000473720 ATG2BQ96BY7 2078 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 LACTBL1A8MY62 500 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 H0YCG3 227 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 SYN3O14994 580 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
SMPD4-217ENST00000473720 PTPN2P17706 415 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 MARCKSP29966 332 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-217ENST00000473720 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
SMPD4-217ENST00000473720 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.33
SMPD4-217ENST00000473720 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 MCL1Q07820 350 aa13.02□□□□□ -0.33
SMPD4-217ENST00000473720 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
SMPD4-217ENST00000473720 SLC5A9Q2M3M2 681 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms