RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 ZNF568Q3ZCX4 644 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 APBB1IPQ7Z5R6 666 aaPredicted RBP19.71■□□□□ 0.75
SNX4-204ENST00000473417 PLCD3Q8N3E9 789 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 PAGE5Q96GU1 130 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 IPO9Q96P70 1041 aaKnown RBP19.71■□□□□ 0.75
SNX4-204ENST00000473417 PPP1R10Q96QC0 940 aaKnown RBP19.71■□□□□ 0.75
SNX4-204ENST00000473417 CDT1Q9H211 546 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 USP25Q9UHP3 1055 aa19.71■□□□□ 0.75
SNX4-204ENST00000473417 HARSP12081 509 aaKnown RBP19.7■□□□□ 0.74
SNX4-204ENST00000473417 SCP2P22307 547 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 GRM5P41594 1212 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 NHLH1Q02575 133 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 CUL4BQ13620 913 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 LILRA6Q6PI73 481 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 MPZL3Q6UWV2 235 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 CYP26C1Q6V0L0 522 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 ZPBP2Q6X784 338 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 SUGP1Q8IWZ8 645 aaKnown RBP19.7■□□□□ 0.74
SNX4-204ENST00000473417 UBALD2Q8IYN6 164 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 FBXL6Q8N531 539 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 CEP120Q8N960 986 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 PIK3R5Q8WYR1 880 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 KCNN1Q92952 543 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 HPS3Q969F9 1004 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 ST6GALNAC4Q9H4F1 302 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 PLEKHA4Q9H4M7 779 aa19.7■□□□□ 0.74
SNX4-204ENST00000473417 CCDC195A0A1B0GUA6 201 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 TMEM189-UBE2V1I3L0A0 370 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 ABLIM1O14639 778 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 TGM5O43548 720 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 TOM1L1O75674 476 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 RFPL2O75678 378 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 GCNT3O95395 438 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 ASGR2P07307 311 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 MYBP10242 640 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 RPL17P18621 184 aaKnown RBP19.69■□□□□ 0.74
SNX4-204ENST00000473417 PROZP22891 400 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 MATR3P43243 847 aaKnown RBP eCLIP19.69■□□□□ 0.74
SNX4-204ENST00000473417 LIG4P49917 911 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 OSTNP61366 133 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 GLRA4Q5JXX5 417 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 FAM171A1Q5VUB5 890 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 CNNM4Q6P4Q7 775 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 PRSS55Q6UWB4 352 aaPredicted RBP19.69■□□□□ 0.74
SNX4-204ENST00000473417 OTOP3Q7RTS5 596 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 PALB2Q86YC2 1186 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 GLYCTKQ8IVS8 523 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 ACSF2Q96CM8 615 aaPredicted RBP19.69■□□□□ 0.74
SNX4-204ENST00000473417 TTPALQ9BTX7 342 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 FGFBP2Q9BYJ0 223 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 OLFML3Q9NRN5 406 aa19.69■□□□□ 0.74
SNX4-204ENST00000473417 HNRNPDLO14979 420 aaKnown RBP19.68■□□□□ 0.74
SNX4-204ENST00000473417 ZNF202O95125 648 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 SPATA31D3P0C874 917 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 MCF2P10911 925 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 ABCD1P33897 745 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 CASP5P51878 434 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 ELAVL2Q12926 359 aaKnown RBP19.68■□□□□ 0.74
SNX4-204ENST00000473417 XKR4Q5GH76 650 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 KRBA2Q6ZNG9 492 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 SPATA31D4Q6ZUB0 917 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 UNC13DQ70J99 1090 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 MAP4K3Q8IVH8 894 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 ZNF707Q96C28 371 aaPredicted RBP19.68■□□□□ 0.74
SNX4-204ENST00000473417 PRRX2Q99811 253 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 CCDC94Q9BW85 323 aaPredicted RBP19.68■□□□□ 0.74
SNX4-204ENST00000473417 SMOC2Q9H3U7 446 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 TOPORSQ9NS56 1045 aaPredicted RBP19.68■□□□□ 0.74
SNX4-204ENST00000473417 ZDHHC7Q9NXF8 308 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 LIMD1Q9UGP4 676 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 ANK1P16157 1881 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 CLUHO75153 1309 aa19.68■□□□□ 0.74
SNX4-204ENST00000473417 CLDN3O15551 220 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 PPP1R37O75864 691 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 PIGRP01833 764 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 KCNA1Q09470 495 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 PSMD5Q16401 504 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 ALKAL1Q6UXT8 129 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 ALYREFQ86V81 257 aaKnown RBP19.67■□□□□ 0.74
SNX4-204ENST00000473417 LNX1Q8TBB1 728 aaPredicted RBP19.67■□□□□ 0.74
SNX4-204ENST00000473417 UROC1Q96N76 676 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 STRA6Q9BX79 667 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 IKZF4Q9H2S9 585 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 WDR6Q9NNW5 1121 aaKnown RBP19.67■□□□□ 0.74
SNX4-204ENST00000473417 FBXW11Q9UKB1 542 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 PCDHB13Q9Y5F0 798 aa19.67■□□□□ 0.74
SNX4-204ENST00000473417 TCHHQ07283 1943 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 NOTCH4Q99466 2003 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 SMIM28A0A1B0GU29 152 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 ANKRD63C9JTQ0 380 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 N4BP1O75113 896 aaKnown RBP19.66■□□□□ 0.74
SNX4-204ENST00000473417 PRPF6O94906 941 aaKnown RBP19.66■□□□□ 0.74
SNX4-204ENST00000473417 CLCNKBP51801 687 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 YARSP54577 528 aaKnown RBP19.66■□□□□ 0.74
SNX4-204ENST00000473417 MCL1Q07820 350 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 NOLC1Q14978 699 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNX4-204ENST00000473417 UPP1Q16831 310 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 L1TD1Q5T7N2 865 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms