RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 C2orf16Q68DN1 1984 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 PODXLO00592 558 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 SYN3O14994 580 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 DCXO43602 365 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 FAM189A1O60320 539 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 IDEP14735 1019 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 LRPAP1P30533 357 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ME1P48163 572 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 KRT85P78386 507 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 PKP1Q13835 747 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ZBTB6Q15916 424 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 RTP2Q5QGT7 225 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 FOXD4L5Q5VV16 416 aaPredicted RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 LILRA6Q6PI73 481 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 CD300LGQ6UXG3 332 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ANKS3Q6ZW76 656 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 FOXD4L4Q8WXT5 416 aaPredicted RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 RABGGTAQ92696 567 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ACCSQ96QU6 501 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 MSTO1Q9BUK6 570 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 PANK2Q9BZ23 570 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ASB7Q9H672 318 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 TMEM206Q9H813 350 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 ZDHHC7Q9NXF8 308 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 CPSF3Q9UKF6 684 aaKnown RBP13.8□□□□□ -0.2
C9orf85-204ENST00000473252 DERAQ9Y315 318 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 BACE2Q9Y5Z0 518 aa13.8□□□□□ -0.2
C9orf85-204ENST00000473252 KIAA0391O15091 583 aaKnown RBP13.79□□□□□ -0.2
C9orf85-204ENST00000473252 GPR37L1O60883 481 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 GCNT3O95395 438 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 CXCL8P10145 99 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 SOX4Q06945 474 aaPredicted RBP13.79□□□□□ -0.2
C9orf85-204ENST00000473252 PSMD5Q16401 504 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 RARS2Q5T160 578 aaKnown RBP13.79□□□□□ -0.2
C9orf85-204ENST00000473252 RESP18Q5W5W9 173 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 ADALQ6DHV7 355 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 SLC39A4Q6P5W5 647 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 NT5DC4Q86YG4 428 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 RNF135Q8IUD6 432 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 C7orf25Q9BPX7 421 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 TRIM9Q9C026 710 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 EPHX3Q9H6B9 360 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 GOLGA2P5Q9HBQ8 144 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 MAN1C1Q9NR34 630 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 CACNG4Q9UBN1 327 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 NUB1Q9Y5A7 615 aa13.79□□□□□ -0.2
C9orf85-204ENST00000473252 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 POLR2DO15514 142 aaKnown RBP13.78□□□□□ -0.2
C9orf85-204ENST00000473252 MEFVO15553 781 aaPredicted RBP13.78□□□□□ -0.2
C9orf85-204ENST00000473252 TGM5O43548 720 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 GARTP22102 1010 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 TNFSF9P41273 254 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 CLCN6P51797 869 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 RAB33AQ14088 237 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
C9orf85-204ENST00000473252 UVSSAQ2YD98 709 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 C3orf58Q8NDZ4 430 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 DHX58Q96C10 678 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 RPGRIP1Q96KN7 1286 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 B3GALT6Q96L58 329 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 CLSTN3Q9BQT9 956 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 OXCT2Q9BYC2 517 aaPredicted RBP13.78□□□□□ -0.2
C9orf85-204ENST00000473252 SCAND2PQ9GZW5 306 aaPredicted RBP13.78□□□□□ -0.2
C9orf85-204ENST00000473252 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
C9orf85-204ENST00000473252 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
C9orf85-204ENST00000473252 CCDC195A0A1B0GUA6 201 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 LACTBL1A8MY62 500 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 ANKRD63C9JTQ0 380 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 H7C4K7 107 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 EIF3DO15371 548 aaKnown RBP eCLIP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 POU2F2P09086 479 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 HNRNPA1P09651 372 aaKnown RBP eCLIP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 HOXA9P31269 272 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 SNRPFP62306 86 aaKnown RBP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 FOXD4L6Q3SYB3 417 aaPredicted RBP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 TMC5Q6UXY8 1006 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 FOXD4L3Q6VB84 417 aaPredicted RBP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 PALB2Q86YC2 1186 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 C12orf76Q8N812 135 aaPredicted RBP13.77□□□□□ -0.21
C9orf85-204ENST00000473252 KREMEN2Q8NCW0 462 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 APPL2Q8NEU8 664 aa13.77□□□□□ -0.21
C9orf85-204ENST00000473252 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms