RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZNF268Q14587 947 aaPredicted RBP22.49■■□□□ 1.19
COL18A1-207ENST00000473212 SPATA21Q7Z572 469 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 PASD1Q8IV76 773 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 ZNF516Q92618 1163 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 FAM213AQ9BRX8 229 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 PNMA3Q9UL41 463 aa22.49■■□□□ 1.19
COL18A1-207ENST00000473212 PLA2G6O60733 806 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 CETPP11597 493 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 GJC1P36383 396 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 ADCY8P40145 1251 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 CLEC16AQ2KHT3 1053 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 MAP4K3Q8IVH8 894 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 KIF2BQ8N4N8 673 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 KIFAP3Q92845 792 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 CNKSR1Q969H4 720 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 KMT5AQ9NQR1 393 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 NINJ2Q9NZG7 142 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 ANAPC5Q9UJX4 755 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 COQ4Q9Y3A0 265 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 HGSO14964 777 aaPredicted RBP22.48■■□□□ 1.19
COL18A1-207ENST00000473212 ATF2P15336 505 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 CRELD2Q6UXH1 353 aaPredicted RBP22.48■■□□□ 1.19
COL18A1-207ENST00000473212 DHX37Q8IY37 1157 aaKnown RBP22.48■■□□□ 1.19
COL18A1-207ENST00000473212 C4orf19Q8IY42 314 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 RMDN3Q96TC7 470 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 DCLK3Q9C098 648 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 DEFB129Q9H1M3 183 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 ST6GALNAC4Q9H4F1 302 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 RIPK3Q9Y572 518 aa22.48■■□□□ 1.19
COL18A1-207ENST00000473212 SCP2P22307 547 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 COPS2P61201 443 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 PSMC5P62195 406 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 CYP24A1Q07973 514 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 BNIP1Q12981 228 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 OGFOD1Q8N543 542 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 AGAP11Q8TF27 550 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 TGS1Q96RS0 853 aaKnown RBP22.47■■□□□ 1.19
COL18A1-207ENST00000473212 KLHL11Q9NVR0 708 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 ARL2BPQ9Y2Y0 163 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 DOCK5Q9H7D0 1870 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 LYPLA2O95372 231 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 GAS8O95995 478 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 GBP2P32456 591 aaPredicted RBP22.47■■□□□ 1.19
COL18A1-207ENST00000473212 MYO1EQ12965 1108 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 DMP1Q13316 513 aaPredicted RBP22.47■■□□□ 1.19
COL18A1-207ENST00000473212 FITM2Q8N6M3 262 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 KLHL29Q96CT2 875 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 TCEAL9Q9UHQ7 104 aa22.47■■□□□ 1.19
COL18A1-207ENST00000473212 HNRNPDLO14979 420 aaKnown RBP22.46■■□□□ 1.19
COL18A1-207ENST00000473212 STX2P32856 288 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 TAS1R3Q7RTX0 852 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 SRRM1Q8IYB3 904 aaKnown RBP22.46■■□□□ 1.19
COL18A1-207ENST00000473212 PRCCQ92733 491 aaPredicted RBP22.46■■□□□ 1.19
COL18A1-207ENST00000473212 PDCD2LQ9BRP1 358 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 TRAIPQ9BWF2 469 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 UNGP13051 313 aaPredicted RBP22.46■■□□□ 1.19
COL18A1-207ENST00000473212 MCOLN2Q8IZK6 566 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 LARGE2Q8N3Y3 721 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 GRK7Q8WTQ7 553 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 RMDN2Q96LZ7 410 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
COL18A1-207ENST00000473212 PGAP2Q9UHJ9 254 aa22.46■■□□□ 1.19
COL18A1-207ENST00000473212 PTPRJQ12913 1337 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 MYPNQ86TC9 1320 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 EGFRP00533 1210 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 CLNS1AP54105 237 aaKnown RBP22.45■■□□□ 1.18
COL18A1-207ENST00000473212 CGB2Q6NT52 195 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 SYDE1Q6ZW31 735 aaPredicted RBP22.45■■□□□ 1.18
COL18A1-207ENST00000473212 GBP7Q8N8V2 638 aaPredicted RBP22.45■■□□□ 1.18
COL18A1-207ENST00000473212 CEP170P1Q96L14 293 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 MFSD14AQ96MC6 490 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 IWS1Q96ST2 819 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 EBF2Q9HAK2 575 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 GABBR1Q9UBS5 961 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 SUFUQ9UMX1 484 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 TRIM33Q9UPN9 1127 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 NAALADL1Q9UQQ1 740 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 A8MUI8 341 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 ASNSP08243 561 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 KRT16P08779 473 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 RALAP11233 206 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 TAS2R40P59535 323 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 SNRPFP62306 86 aaKnown RBP22.45■■□□□ 1.18
COL18A1-207ENST00000473212 ATL2Q8NHH9 583 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 TBC1D22BQ9NU19 505 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 PRKAG3Q9UGI9 489 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 STK38LQ9Y2H1 464 aa22.45■■□□□ 1.18
COL18A1-207ENST00000473212 ANP32DO95626 131 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 MAN1A1P33908 653 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 NIPA1Q7RTP0 329 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 KIRREL3Q8IZU9 778 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 NSMCE1Q8WV22 266 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 MAIP1Q8WWC4 291 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 DDX27Q96GQ7 796 aaKnown RBP22.44■■□□□ 1.18
COL18A1-207ENST00000473212 C9orf72Q96LT7 481 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 SLC38A10Q9HBR0 1119 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 DONSONQ9NYP3 566 aa22.44■■□□□ 1.18
COL18A1-207ENST00000473212 WDR64B1ANS9 1081 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 CAV1Q03135 178 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 THOC1Q96FV9 657 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms