RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 HERVK_113Q902F9 699 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 DPF3Q92784 378 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 CCDC127Q96BQ5 260 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 SCLYQ96I15 445 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 ZNF560Q96MR9 790 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 SLC9A7Q96T83 725 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 TMEM175Q9BSA9 504 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 EIF2AQ9BY44 585 aaKnown RBP6.32□□□□□ -1.4
EPHA4-212ENST00000472696 OXCT2Q9BYC2 517 aaPredicted RBP6.32□□□□□ -1.4
EPHA4-212ENST00000472696 TMEM117Q9H0C3 514 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 VPS16Q9H269 839 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 NXF3Q9H4D5 531 aaKnown RBP6.32□□□□□ -1.4
EPHA4-212ENST00000472696 PDE11AQ9HCR9 933 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 RAB20Q9NX57 234 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 IFNKQ9P0W0 207 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 PARP2Q9UGN5 583 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 COL4A6Q14031 1691 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 ANK1P16157 1881 aa6.32□□□□□ -1.4
EPHA4-212ENST00000472696 PDCD11Q14690 1871 aaKnown RBP6.32□□□□□ -1.4
EPHA4-212ENST00000472696 ALPK3Q96L96 1907 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 SMIM28A0A1B0GU29 152 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 ANO9A1A5B4 782 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 ARL5CA6NH57 179 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 PES1O00541 588 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 TRAPPC3O43617 180 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 RRP9O43818 475 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 NRDCO43847 1150 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 PHACTR2O75167 634 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 OFD1O75665 1012 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 HARSP12081 509 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 CSF2RAP15509 400 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 TRIM21P19474 475 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 KCNJ6P48051 423 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 ZNF75DP51815 510 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 GSDMDP57764 484 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 MYL7Q01449 175 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 PPP3CAQ08209 521 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 CCDC173Q0VFZ6 552 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 TUSC3Q13454 348 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 TRPC3Q13507 836 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 SV2CQ496J9 727 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 EPC2Q52LR7 807 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 C1orf220Q5T0J3 134 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 TRAPPC11Q7Z392 1133 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 DEFB128Q7Z7B8 93 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 CNGA4Q8IV77 575 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 VSTM4Q8IW00 320 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 DRC7Q8IY82 874 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 GPR65Q8IYL9 337 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 CMTR2Q8IYT2 770 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 C7orf61Q8IZ16 206 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 NEK11Q8NG66 645 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 SYN2Q92777 582 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 BADQ92934 168 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 KIF12Q96FN5 646 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 FAM193BQ96PV7 902 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 PPP1R10Q96QC0 940 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 XPO4Q9C0E2 1151 aaKnown RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 IKZF4Q9H2S9 585 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 CYP3A43Q9HB55 503 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 DPP3Q9NY33 737 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 TAB2Q9NYJ8 693 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 KIAA1522Q9P206 1035 aaPredicted RBP6.31□□□□□ -1.4
EPHA4-212ENST00000472696 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 RWDD3Q9Y3V2 267 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 INSL6Q9Y581 213 aa6.31□□□□□ -1.4
EPHA4-212ENST00000472696 SCN5AQ14524 2016 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 PIRO00625 290 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 DGKIO75912 1065 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 KIF4AO95239 1232 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ADCY5O95622 1261 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ASS1P00966 412 aaKnown RBP6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ALDH2P05091 517 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 AKAP5P24588 427 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ITGB8P26012 769 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 PON1P27169 355 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 BMP8BP34820 402 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 GCLMP48507 274 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 MFAP3P55082 362 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 OSTNP61366 133 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 WDR5P61964 334 aaKnown RBP6.3□□□□□ -1.4
EPHA4-212ENST00000472696 DLG4P78352 724 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 HTRA4P83105 476 aaPredicted RBP6.3□□□□□ -1.4
EPHA4-212ENST00000472696 TFAMQ00059 246 aaKnown RBP6.3□□□□□ -1.4
EPHA4-212ENST00000472696 DSC1Q08554 894 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 KCNMA1Q12791 1236 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ELAVL2Q12926 359 aaKnown RBP6.3□□□□□ -1.4
EPHA4-212ENST00000472696 BIRC3Q13489 604 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 NCOA4Q13772 614 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ARID5BQ14865 1188 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 CBWD6Q4V339 395 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 HSP90AA4PQ58FG1 418 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 CBWD3Q5JTY5 395 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 CBWD5Q5RIA9 395 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 TMEM240Q5SV17 173 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 ZBTB41Q5SVQ8 909 aa6.3□□□□□ -1.4
EPHA4-212ENST00000472696 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms