RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 FRS2Q8WU20 508 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 SLC39A13Q96H72 371 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 LGR4Q9BXB1 951 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 PUS3Q9BZE2 481 aaKnown RBP8.09□□□□□ -1.11
SCAF4-205ENST00000472318 DDX4Q9NQI0 724 aaKnown RBP8.09□□□□□ -1.11
SCAF4-205ENST00000472318 MARCH2Q9P0N8 246 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 A0A1B0GUL6 1792 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 VPS13AQ96RL7 3174 aa8.09□□□□□ -1.11
SCAF4-205ENST00000472318 LOC285556D6RIA3 1793 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 SLC15A5A6NIM6 579 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 ALG1L2C9J202 215 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 ENTPD3O75355 529 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 ALDH1L1O75891 902 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 FGAP02671 866 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 SLC5A1P13866 664 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 MAN1A1P33908 653 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 CDKN1CP49918 316 aaPredicted RBP8.08□□□□□ -1.12
SCAF4-205ENST00000472318 GRB14Q14449 540 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 INF2Q27J81 1249 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 ERICH6BQ5W0A0 696 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 CCDC174Q6PII3 467 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 Q8N1Y9 231 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 PAF1Q8N7H5 531 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.08□□□□□ -1.12
SCAF4-205ENST00000472318 ARPC5LQ9BPX5 153 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 IDI2Q9BXS1 227 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 ACTR10Q9NZ32 417 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 SIT1Q9Y3P8 196 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 RFX7Q2KHR2 1363 aa8.08□□□□□ -1.12
SCAF4-205ENST00000472318 PGK1P00558 417 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 CELA3BP08861 270 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 PRDX5P30044 214 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 BACE1P56817 501 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 E4F1Q66K89 784 aaPredicted RBP8.07□□□□□ -1.12
SCAF4-205ENST00000472318 LMBR1LQ6UX01 489 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 G2E3Q7L622 706 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 OTOP2Q7RTS6 562 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 C8orf58Q8NAV2 365 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 BTN2A2Q8WVV5 523 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 NOX5Q96PH1 765 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 ZNF700Q9H0M5 742 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 PNNQ9H307 717 aaKnown RBP8.07□□□□□ -1.12
SCAF4-205ENST00000472318 ALG13Q9NP73 1137 aaKnown RBP8.07□□□□□ -1.12
SCAF4-205ENST00000472318 IL23AQ9NPF7 189 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 CASS4Q9NQ75 786 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 MAP3K20Q9NYL2 800 aaKnown RBP8.07□□□□□ -1.12
SCAF4-205ENST00000472318 PRKAG3Q9UGI9 489 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 MYH3P11055 1940 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 WDR87Q6ZQQ6 2873 aa8.07□□□□□ -1.12
SCAF4-205ENST00000472318 GAKO14976 1311 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 PTPRZ1P23471 2315 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-205ENST00000472318 MED19A0JLT2 244 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-205ENST00000472318 B2RBV5 119 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 TBX1O43435 398 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 ZNF500O60304 480 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-205ENST00000472318 LPXNO60711 386 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 GLRX3O76003 335 aaKnown RBP8.06□□□□□ -1.12
SCAF4-205ENST00000472318 FGBP02675 491 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 CA3P07451 260 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 SLC6A11P48066 632 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 TTF1Q15361 905 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-205ENST00000472318 CCDC57Q2TAC2 916 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 ZNF280DQ6N043 979 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 ZNF227Q86WZ6 799 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 MIB1Q86YT6 1006 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 CARFQ8N187 725 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 TMEM199Q8N511 208 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 LINC00482Q8N8I6 264 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 ARNTL2Q8WYA1 636 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 PPP1R14AQ96A00 147 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 AP5M1Q9H0R1 490 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 UBE2ZQ9H832 354 aaPredicted RBP8.06□□□□□ -1.12
SCAF4-205ENST00000472318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.06□□□□□ -1.125e-10■■■■■ 27
SCAF4-205ENST00000472318 XPNPEP3Q9NQH7 507 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 CHD6Q8TD26 2715 aa8.06□□□□□ -1.12
SCAF4-205ENST00000472318 NCOR2Q9Y618 2525 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 DOCK1Q14185 1865 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 DMXL1Q9Y485 3027 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-205ENST00000472318 SCG5P05408 212 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 C8BP07358 591 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 CYP2C18P33260 490 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 ID4P47928 161 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 KRTAP10-2P60368 255 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 PICALMQ13492 652 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 SQSTM1Q13501 440 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 RAPGEF1Q13905 1077 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 TCEA2Q15560 299 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 TESK1Q15569 626 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 SHROOM1Q2M3G4 852 aaPredicted RBP8.05□□□□□ -1.12
SCAF4-205ENST00000472318 TKFCQ3LXA3 575 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 LEXMQ3ZCV2 418 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 CAVIN4Q5BKX8 364 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 NT5DC1Q5TFE4 455 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 IQCEQ6IPM2 695 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 ASCL5Q7RTU5 278 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 RIOX2Q8IUF8 465 aa8.05□□□□□ -1.12
SCAF4-205ENST00000472318 CCDC103Q8IW40 242 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms