RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SLC10A6Q3KNW5 377 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 VARS2Q5ST30 1063 aaKnown RBP24.62■■□□□ 1.53
C9orf3-213ENST00000471978 RTL10Q7L3V2 364 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 HAUS6Q7Z4H7 955 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 GPBP1Q86WP2 473 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 ST13P5Q8NFI4 369 aaPredicted RBP24.62■■□□□ 1.53
C9orf3-213ENST00000471978 BICD1Q96G01 975 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 REEP2Q9BRK0 252 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 CDH7Q9ULB5 785 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 NUMBLQ9Y6R0 609 aa24.62■■□□□ 1.53
C9orf3-213ENST00000471978 CITO14578 2027 aa24.61■■□□□ 1.53
C9orf3-213ENST00000471978 PI15O43692 258 aa24.61■■□□□ 1.53
C9orf3-213ENST00000471978 POU2F2P09086 479 aa24.61■■□□□ 1.53
C9orf3-213ENST00000471978 AOC1P19801 751 aa24.61■■□□□ 1.53
C9orf3-213ENST00000471978 LONP1P36776 959 aaKnown RBP24.61■■□□□ 1.53
C9orf3-213ENST00000471978 SF3A1Q15459 793 aaKnown RBP24.61■■□□□ 1.53
C9orf3-213ENST00000471978 RASSF8Q8NHQ8 419 aa24.61■■□□□ 1.53
C9orf3-213ENST00000471978 LRRC15Q8TF66 581 aa24.61■■□□□ 1.53
C9orf3-213ENST00000471978 VPS37CA5D8V6 355 aaPredicted RBP24.6■■□□□ 1.53
C9orf3-213ENST00000471978 SYN3O14994 580 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 GRIN1Q05586 938 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 KARSQ15046 597 aaKnown RBP24.6■■□□□ 1.53
C9orf3-213ENST00000471978 SLC8B1Q6J4K2 584 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 MYCT1Q8N699 235 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 HAPLN2Q9GZV7 340 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 BLOC1S4Q9NUP1 217 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 HCFC1R1Q9NWW0 138 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 CA14Q9ULX7 337 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 DOCK6Q96HP0 2047 aa24.6■■□□□ 1.53
C9orf3-213ENST00000471978 KRBA1A5PL33 1030 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 STK25O00506 426 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 FAM13AO94988 1023 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 CLTAP09496 248 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 CXCL8P10145 99 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 PLCG1P19174 1290 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 ROR1Q01973 937 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 CUL4AQ13619 759 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 MCM6Q14566 821 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 ZNF461Q8TAF7 563 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 ITFG1Q8TB96 612 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 GPR152Q8TDT2 470 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 RAD54LQ92698 747 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 FGF13Q92913 245 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 KCNN1Q92952 543 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 RTP3Q9BQQ7 232 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 PLEKHA5Q9HAU0 1116 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 DNMT3BQ9UBC3 853 aaKnown RBP24.59■■□□□ 1.53
C9orf3-213ENST00000471978 TUBGCP4Q9UGJ1 667 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 TBX20Q9UMR3 447 aa24.59■■□□□ 1.53
C9orf3-213ENST00000471978 VPS13AQ96RL7 3174 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 H7C4K7 107 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 KRT18P05783 430 aaKnown RBP24.58■■□□□ 1.53
C9orf3-213ENST00000471978 RFX1P22670 979 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 MCM4P33991 863 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 LIG4P49917 911 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 ARPP19P56211 112 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 PABPC1LQ4VXU2 614 aaKnown RBP24.58■■□□□ 1.53
C9orf3-213ENST00000471978 PARM1Q6UWI2 310 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 FGF14Q92915 247 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 SUSD3Q96L08 255 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 RPP25Q9BUL9 199 aaKnown RBP24.58■■□□□ 1.53
C9orf3-213ENST00000471978 PARVGQ9HBI0 331 aa24.58■■□□□ 1.53
C9orf3-213ENST00000471978 DMDP11532 3685 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 WDR27A2RRH5 827 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 K7ENM7 598 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 HNRNPDLO14979 420 aaKnown RBP24.57■■□□□ 1.52
C9orf3-213ENST00000471978 TBC1D4O60343 1298 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 ABLIM3O94929 683 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 SCP2P22307 547 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 ELF1P32519 619 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 ZNF131P52739 623 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 SPAG1Q07617 926 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 MRPL58Q14197 206 aaKnown RBP24.57■■□□□ 1.52
C9orf3-213ENST00000471978 KCNH3Q9ULD8 1083 aa24.57■■□□□ 1.52
C9orf3-213ENST00000471978 TTC26A0AVF1 554 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 PRRG1O14668 218 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 TRAK2O60296 914 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 PDCP20941 246 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 TNFSF9P41273 254 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 CTXN3Q4LDR2 81 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 MTSS1LQ765P7 747 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 CCDC105Q8IYK2 499 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 APPL2Q8NEU8 664 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 KIF12Q96FN5 646 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 ZHX3Q9H4I2 956 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 SLC2A4RGQ9NR83 387 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 FBXL5Q9UKA1 691 aa24.56■■□□□ 1.52
C9orf3-213ENST00000471978 ARHGEF37A1IGU5 675 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 TBCAO75347 108 aaKnown RBP24.55■■□□□ 1.52
C9orf3-213ENST00000471978 LRG1P02750 347 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 ATF2P15336 505 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 PPP2R3AQ06190 1150 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 KYAT1Q16773 422 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 TMEM130Q8N3G9 435 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 LARP4BQ92615 738 aaKnown RBP24.55■■□□□ 1.52
C9orf3-213ENST00000471978 DDX12PQ92771 950 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 TBC1D17Q9HA65 648 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 CYP4F11Q9HBI6 524 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 ARHGEF3Q9NR81 526 aa24.55■■□□□ 1.52
C9orf3-213ENST00000471978 MRPS23Q9Y3D9 190 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms