RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 DOCK8Q8NF50 2099 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 A0A0B4J269 797 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
SSR4-208ENST00000471880 TKTP29401 623 aaKnown RBP16.11■□□□□ 0.17
SSR4-208ENST00000471880 MTHFRP42898 656 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 ARPP19P56211 112 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 KCNA1Q09470 495 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 ENOX2Q16206 610 aaKnown RBP16.11■□□□□ 0.17
SSR4-208ENST00000471880 E2F4Q16254 413 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 XKR4Q5GH76 650 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 L1TD1Q5T7N2 865 aaKnown RBP16.11■□□□□ 0.17
SSR4-208ENST00000471880 PDXDC1Q6P996 788 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
SSR4-208ENST00000471880 STXBP4Q6ZWJ1 553 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 C3orf58Q8NDZ4 430 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 HPS3Q969F9 1004 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 POMKQ9H5K3 350 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 C11orf16Q9NQ32 467 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 RCOR1Q9UKL0 485 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 ZDHHC9Q9Y397 364 aa16.11■□□□□ 0.17
SSR4-208ENST00000471880 MEFVO15553 781 aaPredicted RBP16.1■□□□□ 0.17
SSR4-208ENST00000471880 TGM5O43548 720 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
SSR4-208ENST00000471880 CASP1P29466 404 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 RPL9P32969 192 aaKnown RBP16.1■□□□□ 0.17
SSR4-208ENST00000471880 GUCY2FP51841 1108 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 CASP5P51878 434 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 LIN9Q5TKA1 542 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 RESP18Q5W5W9 173 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 TMEM130Q8N3G9 435 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 LEO1Q8WVC0 666 aaPredicted RBP16.1■□□□□ 0.17
SSR4-208ENST00000471880 PIK3R5Q8WYR1 880 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 SUSD6Q92537 303 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 SAAL1Q96ER3 474 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 NECTIN4Q96NY8 510 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 TRIM9Q9C026 710 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 ST6GALNAC4Q9H4F1 302 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 RXFP1Q9HBX9 757 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 KCNH3Q9ULD8 1083 aa16.1■□□□□ 0.17
SSR4-208ENST00000471880 UBQLN1Q9UMX0 589 aaKnown RBP16.1■□□□□ 0.17
SSR4-208ENST00000471880 CCDC195A0A1B0GUA6 201 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 A0A1B0GVL5 298 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 TTC26A0AVF1 554 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 FAM86C2PA6NEL3 165 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 TMEM189-UBE2V1I3L0A0 370 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 RFPL2O75678 378 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 OR1D2P34982 312 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 ALCAMQ13740 583 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 POSTNQ15063 836 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 JADE1Q6IE81 842 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 RNF135Q8IUD6 432 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 GRAMD1CQ8IYS0 662 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 BEST2Q8NFU1 509 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 LNX1Q8TBB1 728 aaPredicted RBP16.09■□□□□ 0.17
SSR4-208ENST00000471880 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
SSR4-208ENST00000471880 FAM213AQ9BRX8 229 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 FGFBP2Q9BYJ0 223 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 PCIF1Q9H4Z3 704 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 OLFML3Q9NRN5 406 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 KBTBD4Q9NVX7 518 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 MUTYHQ9UIF7 546 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 CPSF3Q9UKF6 684 aaKnown RBP16.09■□□□□ 0.17
SSR4-208ENST00000471880 POLIQ9UNA4 740 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 NR2E1Q9Y466 385 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 CDY1Q9Y6F8 540 aa16.09■□□□□ 0.17
SSR4-208ENST00000471880 TCHHQ07283 1943 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 DCXO43602 365 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 NFICP08651 508 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 ALADP13716 330 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 DSTYKQ6XUX3 929 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 ANKS3Q6ZW76 656 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 SMG7Q92540 1137 aaKnown RBP16.08■□□□□ 0.16
SSR4-208ENST00000471880 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 C1QTNF1Q9BXJ1 281 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 TMEM206Q9H813 350 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 GDPD2Q9HCC8 539 aa16.08■□□□□ 0.16
SSR4-208ENST00000471880 ZNF318Q5VUA4 2279 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 ADAM12O43184 909 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 PPP1R37O75864 691 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 PFKFB1P16118 471 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 FGFR3P22607 806 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 PPM1LQ5SGD2 360 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 VARS2Q5ST30 1063 aaKnown RBP16.07■□□□□ 0.16
SSR4-208ENST00000471880 CCDC149Q6ZUS6 474 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 GPR149Q86SP6 731 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 CD302Q8IX05 232 aa16.07■□□□□ 0.16
SSR4-208ENST00000471880 TDRD5Q8NAT2 981 aaKnown RBP16.07■□□□□ 0.16
SSR4-208ENST00000471880 GLIS3Q8NEA6 775 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms