RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FGF13Q92913 245 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 MCRS1Q96EZ8 462 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 EPSTI1Q96J88 318 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 ZSWIM3Q96MP5 696 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 TBC1D32Q96NH3 1257 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 CLIC6Q96NY7 704 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 FIZ1Q96SL8 496 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 KXD1Q9BQD3 176 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 REEP2Q9BRK0 252 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 ADPGKQ9BRR6 497 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 TCHPQ9BT92 498 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 MRPL4Q9BYD3 311 aaKnown RBP8.85□□□□□ -0.99
USP48-207ENST00000471752 PANK2Q9BZ23 570 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 FOXQ1Q9C009 403 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 KCNH6Q9H252 994 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 ANKFY1Q9P2R3 1169 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 MTRRQ9UBK8 725 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 SSX2IPQ9Y2D8 614 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 VWA8A3KMH1 1905 aa8.85□□□□□ -0.99
USP48-207ENST00000471752 TRIP11Q15643 1979 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 TDRD15B5MCY1 1934 aaKnown RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 WDR27A2RRH5 827 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 CARNS1A5YM72 827 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 LACTBL1A8MY62 500 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 H3BQV1 296 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 SPTLC1O15269 473 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 MOSPD3O75425 235 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 ABLIM3O94929 683 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 CXCL8P10145 99 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 MCF2P10911 925 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 KCNE1P15382 129 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 GJA1P17302 382 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 CEBPBP17676 345 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 PLCG1P19174 1290 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 AOC1P19801 751 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 MARCKSP29966 332 aaPredicted RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 HOXC13P31276 330 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 WNT7BP56706 349 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 ROR1Q01973 937 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 DMP1Q13316 513 aaPredicted RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 SNW1Q13573 536 aaKnown RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 MRPL58Q14197 206 aaKnown RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 SF3A1Q15459 793 aaKnown RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 ZBTB6Q15916 424 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 PPM1LQ5SGD2 360 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 TANGO2Q6ICL3 276 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 MPZL3Q6UWV2 235 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.84□□□□□ -0.99
USP48-207ENST00000471752 DENND4AQ7Z401 1863 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 GPBP1Q86WP2 473 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 GPR65Q8IYL9 337 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 ACAP3Q96P50 834 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 TMEM209Q96SK2 561 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 RHOBTB2Q9BYZ6 727 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 MFSD1Q9H3U5 465 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP48-207ENST00000471752 ZDHHC7Q9NXF8 308 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 CNTN3Q9P232 1028 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 IGSF9Q9P2J2 1179 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 FBXL5Q9UKA1 691 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 FBXL21Q9UKT6 434 aa8.84□□□□□ -0.99
USP48-207ENST00000471752 NCANO14594 1321 aa8.83□□□□□ -1
USP48-207ENST00000471752 PHLPP2Q6ZVD8 1323 aa8.83□□□□□ -1
USP48-207ENST00000471752 CACNA1IQ9P0X4 2223 aa8.83□□□□□ -1
USP48-207ENST00000471752 A0A087X0B3 334 aa8.83□□□□□ -1
USP48-207ENST00000471752 TMEM189-UBE2V1I3L0A0 370 aa8.83□□□□□ -1
USP48-207ENST00000471752 STK25O00506 426 aa8.83□□□□□ -1
USP48-207ENST00000471752 SOAT2O75908 522 aa8.83□□□□□ -1
USP48-207ENST00000471752 CLCN5P51795 746 aa8.83□□□□□ -1
USP48-207ENST00000471752 NCKAP1LP55160 1127 aa8.83□□□□□ -1
USP48-207ENST00000471752 CEBPZQ03701 1054 aaKnown RBP8.83□□□□□ -1
USP48-207ENST00000471752 MCL1Q07820 350 aa8.83□□□□□ -1
USP48-207ENST00000471752 KCNA1Q09470 495 aa8.83□□□□□ -1
USP48-207ENST00000471752 PTPAQ15257 358 aa8.83□□□□□ -1
USP48-207ENST00000471752 ENOX2Q16206 610 aaKnown RBP8.83□□□□□ -1
USP48-207ENST00000471752 RILPL1Q5EBL4 403 aa8.83□□□□□ -1
USP48-207ENST00000471752 RNF19BQ6ZMZ0 732 aa8.83□□□□□ -1
USP48-207ENST00000471752 HAUS6Q7Z4H7 955 aa8.83□□□□□ -1
USP48-207ENST00000471752 NPAS3Q8IXF0 933 aa8.83□□□□□ -1
USP48-207ENST00000471752 DTWD2Q8NBA8 298 aa8.83□□□□□ -1
USP48-207ENST00000471752 RSPRY1Q96DX4 576 aa8.83□□□□□ -1
USP48-207ENST00000471752 CCDC94Q9BW85 323 aaPredicted RBP8.83□□□□□ -1
USP48-207ENST00000471752 FGFBP2Q9BYJ0 223 aa8.83□□□□□ -1
USP48-207ENST00000471752 TBC1D17Q9HA65 648 aa8.83□□□□□ -1
USP48-207ENST00000471752 DLGAP2Q9P1A6 1054 aa8.83□□□□□ -1
USP48-207ENST00000471752 CEP72Q9P209 647 aa8.83□□□□□ -1
USP48-207ENST00000471752 STK39Q9UEW8 545 aa8.83□□□□□ -1
USP48-207ENST00000471752 CDH7Q9ULB5 785 aa8.83□□□□□ -1
USP48-207ENST00000471752 SMC3Q9UQE7 1217 aa8.83□□□□□ -1
USP48-207ENST00000471752 BACE2Q9Y5Z0 518 aa8.83□□□□□ -1
USP48-207ENST00000471752 ZMYM2Q9UBW7 1377 aa8.83□□□□□ -1
USP48-207ENST00000471752 CEP250Q9BV73 2442 aa8.82□□□□□ -1
USP48-207ENST00000471752 NCOR2Q9Y618 2525 aa8.82□□□□□ -1
USP48-207ENST00000471752 TTC26A0AVF1 554 aa8.82□□□□□ -1
USP48-207ENST00000471752 LAD1O00515 517 aa8.82□□□□□ -1
USP48-207ENST00000471752 MAP3K13O43283 966 aa8.82□□□□□ -1
USP48-207ENST00000471752 ST18O60284 1047 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms