RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PDIK1LQ8N165 341 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 PRMT6Q96LA8 375 aaPredicted RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 C1QTNF7Q9BXJ2 289 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CABYRO75952 493 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 SOAT1P35610 550 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 LRRC63Q05C16 580 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 STILQ15468 1287 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 FAM171A1Q5VUB5 890 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 KRT39Q6A163 491 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CLEC10AQ8IUN9 316 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 SYTL1Q8IYJ3 562 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 HEMGNQ9BXL5 484 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 NDEL1Q9GZM8 345 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 EIF3DO15371 548 aaKnown RBP eCLIP9.04□□□□□ -0.96
CD47-204ENST00000471694 HPGDP15428 266 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 HOXA7P31268 230 aaPredicted RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 TRMT10CQ7L0Y3 403 aaKnown RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
CD47-204ENST00000471694 LCA5Q86VQ0 697 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 DDX42Q86XP3 938 aaKnown RBP eCLIP9.04□□□□□ -0.96
CD47-204ENST00000471694 MIB1Q86YT6 1006 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CLYBLQ8N0X4 340 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 FBXO18Q8NFZ0 1043 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CD99L2Q8TCZ2 262 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 DNAJB3Q8WWF6 145 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CGRRF1Q99675 332 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 DESI2Q9BSY9 194 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ISCA1Q9BUE6 129 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 FANCLQ9NW38 375 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 DPP3Q9NY33 737 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ZMYND8Q9ULU4 1186 aaPredicted RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 CXCL11O14625 94 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 PSMD3O43242 534 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 IFNAR1P17181 557 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CDH6P55285 790 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ANKRD20A4Q4UJ75 823 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ANKRD20A8PQ5CZ79 823 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ANKRD20A2Q5SQ80 823 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ANKRD20A1Q5TYW2 823 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 GDAP1L1Q96MZ0 367 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ZNF558Q96NG5 402 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CHCHD3Q9NX63 227 aaKnown RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 BARHL2Q9NY43 387 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 MTMR4Q9NYA4 1195 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 NYAP2Q9P242 653 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 WDR91A4D1P6 747 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 FGFR2P21802 821 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ACADSBP45954 432 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 IL9RQ01113 521 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 PPP2R2DQ66LE6 453 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 PDXDC1Q6P996 788 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 B4GALNT4Q76KP1 1039 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ENAHQ8N8S7 591 aaPredicted RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 NEDD1Q8NHV4 660 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 KIFC3Q9BVG8 833 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 ASPSCR1Q9BZE9 553 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 SOHLH2Q9NX45 425 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 TBK1Q9UHD2 729 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 DAAM1Q9Y4D1 1078 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 NDUFAB1O14561 156 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 CYB561D2O14569 222 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 TEX33O43247 280 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 E2F6O75461 281 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 SESN3P58005 492 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 COPS2P61201 443 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 NFRKBQ6P4R8 1299 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 UNC13DQ70J99 1090 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 DSG4Q86SJ6 1040 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 PDCD7Q8N8D1 485 aaKnown RBP9.04□□□□□ -0.96
CD47-204ENST00000471694 CCDC138Q96M89 665 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 VPS28Q9UK41 221 aa9.04□□□□□ -0.96
CD47-204ENST00000471694 MAPK13O15264 365 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 KRT7P08729 469 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 ATP1A2P50993 1020 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SCNN1BP51168 640 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 APLP1P51693 650 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 CAMK2GQ13555 558 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 LAMB3Q13751 1172 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 TSNAXIP1Q2TAA8 658 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 DCAF6Q58WW2 860 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 TCP11X2Q5H9J9 407 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 NSUN4Q96CB9 384 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 RPRD1AQ96P16 312 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 NT5C1AQ9BXI3 368 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 INTS2Q9H0H0 1204 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 THAP9Q9H5L6 903 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SETD4Q9NVD3 440 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 FARP2O94887 1054 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 FGFR1P11362 822 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 CREMQ03060 361 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SF3B3Q15393 1217 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 KNOP1Q1ED39 458 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 TBC1D10CQ8IV04 446 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 LMNTD2Q8IXW0 634 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 FBXO22Q8NEZ5 403 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 ZNF507Q8TCN5 953 aa9.03□□□□□ -0.96
CD47-204ENST00000471694 ZNF512BQ96KM6 892 aaPredicted RBP9.03□□□□□ -0.96
CD47-204ENST00000471694 AGAP3Q96P47 875 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms