RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 PCDHGA6Q9Y5G7 932 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 PCDHGA3Q9Y5H0 932 aa4.28□□□□□ -1.72
COPS3-206ENST00000471414 MYBBP1AQ9BQG0 1328 aaKnown RBP4.27□□□□□ -1.73
COPS3-206ENST00000471414 MYADML2A6NDP7 307 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 EDNRBP24530 442 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 TARDBPQ13148 414 aaKnown RBP eCLIP4.27□□□□□ -1.73
COPS3-206ENST00000471414 SYDE2Q5VT97 1194 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 AMOTL1Q8IY63 956 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 SUPT20HQ8NEM7 779 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 IFI44Q8TCB0 444 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 CCHCR1Q8TD31 782 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 NUP133Q8WUM0 1156 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 SLC9A6Q92581 669 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 ZNF764Q96H86 408 aaPredicted RBP4.27□□□□□ -1.73
COPS3-206ENST00000471414 PHACTR3Q96KR7 559 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 ALOXE3Q9BYJ1 711 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 REXO4Q9GZR2 422 aaKnown RBP4.27□□□□□ -1.73
COPS3-206ENST00000471414 DNM3Q9UQ16 869 aa4.27□□□□□ -1.73
COPS3-206ENST00000471414 SALL3Q9BXA9 1300 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 SGTAO43765 313 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 NDUFS2O75306 463 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 ITGAMP11215 1152 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 ALAS1P13196 640 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 FDXRP22570 491 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 CDKN1CP49918 316 aaPredicted RBP4.26□□□□□ -1.73
COPS3-206ENST00000471414 NOMO3P69849 1222 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 HSD11B2P80365 405 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 CDC42EP1Q00587 391 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 MTMR1Q13613 665 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 NOMO2Q5JPE7 1267 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 UBE3BQ7Z3V4 1068 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 LNX2Q8N448 690 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 SIMC1Q8NDZ2 872 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 FAXDC2Q96IV6 333 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 MRGPRX4Q96LA9 322 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 DMRTA2Q96SC8 542 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 C7orf25Q9BPX7 421 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 C11orf54Q9H0W9 315 aaPredicted RBP4.26□□□□□ -1.73
COPS3-206ENST00000471414 R3HDMLQ9H3Y0 253 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 UNKLQ9H9P5 680 aaKnown RBP4.26□□□□□ -1.73
COPS3-206ENST00000471414 GALNT9Q9HCQ5 603 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 VSX1Q9NZR4 365 aaPredicted RBP4.26□□□□□ -1.73
COPS3-206ENST00000471414 USP25Q9UHP3 1055 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 AATKQ6ZMQ8 1374 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 SBNO2Q9Y2G9 1366 aa4.26□□□□□ -1.73
COPS3-206ENST00000471414 TCRBV7S2A1N4TA0A589 114 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 CDHR4A6H8M9 788 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 GABRDO14764 452 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 KIAA0355O15063 1070 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 HTRA2O43464 458 aaPredicted RBP4.25□□□□□ -1.73
COPS3-206ENST00000471414 PPFIA2O75334 1257 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 ERN1O75460 977 aaKnown RBP4.25□□□□□ -1.73
COPS3-206ENST00000471414 GPANK1O95872 356 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 NUDT3O95989 172 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 VAV2P52735 878 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 MXRA7P84157 204 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 AMPD3Q01432 767 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 MPP3Q13368 585 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 ADGRG3Q86Y34 549 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 FITM2Q8N6M3 262 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.25□□□□□ -1.73
COPS3-206ENST00000471414 IL17RDQ8NFM7 739 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 VOPP1Q96AW1 172 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 MARS2Q96GW9 593 aaKnown RBP4.25□□□□□ -1.73
COPS3-206ENST00000471414 Q96MF0 132 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 MED15Q96RN5 788 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 GSTO2Q9H4Y5 243 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 RIOX1Q9H6W3 641 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 FOXJ2Q9P0K8 574 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 ZNHIT2Q9UHR6 403 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 LIMCH1Q9UPQ0 1083 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 RUVBL1Q9Y265 456 aaKnown RBP4.25□□□□□ -1.73
COPS3-206ENST00000471414 NOX1Q9Y5S8 564 aa4.25□□□□□ -1.73
COPS3-206ENST00000471414 HAUS5O94927 633 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 FCER1AP12319 257 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 CDK11BP21127 795 aaKnown RBP4.24□□□□□ -1.73
COPS3-206ENST00000471414 ZNF169Q14929 603 aaPredicted RBP4.24□□□□□ -1.73
COPS3-206ENST00000471414 SPDYE7PQ495Y7 208 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 COLEC12Q5KU26 742 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 ZNF362Q5T0B9 420 aaPredicted RBP4.24□□□□□ -1.73
COPS3-206ENST00000471414 KIAA0895LQ68EN5 471 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 SP5Q6BEB4 398 aaPredicted RBP4.24□□□□□ -1.73
COPS3-206ENST00000471414 DPY19L2P1Q6NXN4 242 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 Q6ZNX1 250 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 TMPRSS9Q7Z410 1059 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 RHOT1Q8IXI2 618 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 NLGN4YQ8NFZ3 816 aaPredicted RBP4.24□□□□□ -1.73
COPS3-206ENST00000471414 RNF31Q96EP0 1072 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 PNKPQ96T60 521 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 SLC13A1Q9BZW2 595 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 RNF181Q9P0P0 153 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.24□□□□□ -1.73
COPS3-206ENST00000471414 TRHDEQ9UKU6 1024 aa4.24□□□□□ -1.73
COPS3-206ENST00000471414 A0A1W2PS29 197 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 SBK3P0C264 359 aa4.23□□□□□ -1.73
COPS3-206ENST00000471414 SIM1P81133 766 aaPredicted RBP4.23□□□□□ -1.73
COPS3-206ENST00000471414 TLE1Q04724 770 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms