RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 MORC3Q14149 939 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 NOMO1Q15155 1222 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 C19orf54Q5BKX5 351 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 NPNTQ6UXI9 565 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 ATG14Q6ZNE5 492 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 SNX33Q8WV41 574 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 ZCCHC14Q8WYQ9 949 aaKnown RBP6.98□□□□□ -1.29
CKS1B-204ENST00000471245 GFM2Q969S9 779 aaKnown RBP6.98□□□□□ -1.29
CKS1B-204ENST00000471245 ZBTB8AQ96BR9 441 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 PTPN18Q99952 460 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 ELAC2Q9BQ52 826 aaKnown RBP6.98□□□□□ -1.29
CKS1B-204ENST00000471245 KLHL11Q9NVR0 708 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 MAGEL2Q9UJ55 1249 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 SPATA31E1Q6ZUB1 1445 aa6.98□□□□□ -1.29
CKS1B-204ENST00000471245 KIAA0232Q92628 1395 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 ANKRD30BQ9BXX2 1392 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 DLC1Q96QB1 1528 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 CAPN8A6NHC0 703 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 GOLIM4O00461 696 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 AKR1B10O60218 316 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 C1QTNF9P0C862 333 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 ZNF28P17035 718 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 MLLT6P55198 1093 aaPredicted RBP6.97□□□□□ -1.29
CKS1B-204ENST00000471245 WNT3AP56704 352 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 CDC42EP1Q00587 391 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 SEMA5AQ13591 1074 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 SEPT2Q15019 361 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 LLGL1Q15334 1064 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 TRIM68Q6AZZ1 485 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 TRMT10BQ6PF06 316 aaKnown RBP6.97□□□□□ -1.29
CKS1B-204ENST00000471245 DARS2Q6PI48 645 aaKnown RBP6.97□□□□□ -1.29
CKS1B-204ENST00000471245 SSH2Q76I76 1423 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 DAAM2Q86T65 1068 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 REXO1L1PQ8IX06 675 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 DRC7Q8IY82 874 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 KAT5Q92993 513 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 GJA10Q969M2 543 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 CDK5RAP3Q96JB5 506 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 SGPP1Q9BX95 441 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 SHANK3Q9BYB0 1731 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 MANSC1Q9H8J5 431 aa6.97□□□□□ -1.29
CKS1B-204ENST00000471245 SMG5Q9UPR3 1016 aaKnown RBP6.97□□□□□ -1.29
CKS1B-204ENST00000471245 TULP4Q9NRJ4 1543 aa6.96□□□□□ -1.29
CKS1B-204ENST00000471245 GPRASP1Q5JY77 1395 aa6.96□□□□□ -1.29
CKS1B-204ENST00000471245 TCAF2A6NFQ2 919 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.3
CKS1B-204ENST00000471245 KLHL18O94889 574 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 FTLP02792 175 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-204ENST00000471245 HMGCRP04035 888 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 SLC5A1P13866 664 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 HNRNPLP14866 589 aaKnown RBP eCLIP6.96□□□□□ -1.3
CKS1B-204ENST00000471245 ECHS1P30084 290 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 LIMS1P48059 325 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 MAP2K6P52564 334 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 SMAD4Q13485 552 aaKnown RBP6.96□□□□□ -1.3
CKS1B-204ENST00000471245 SAFB2Q14151 953 aaKnown RBP eCLIP6.96□□□□□ -1.3
CKS1B-204ENST00000471245 KIAA0753Q2KHM9 967 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 TAS1R1Q7RTX1 841 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 SPICE1Q8N0Z3 855 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 PIK3C3Q8NEB9 887 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 KLHDC4Q8TBB5 520 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 ZNF480Q8WV37 535 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 PRAM1Q96QH2 718 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 SYT17Q9BSW7 474 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
CKS1B-204ENST00000471245 PHTF1Q9UMS5 762 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 POLHQ9Y253 713 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 PCDHB1Q9Y5F3 818 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 PMF1-BGLAPU3KQ54 211 aa6.96□□□□□ -1.3
CKS1B-204ENST00000471245 DAPK3O43293 454 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 PRAMEF4O60810 478 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
CKS1B-204ENST00000471245 STAT5BP51692 787 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 KCNQ1P51787 676 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 HK3P52790 923 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 GPSM2P81274 684 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 UBE3CQ15386 1083 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 ZNF827Q17R98 1081 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 ABHD15Q6UXT9 468 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 CLEC14AQ86T13 490 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 RHOT1Q8IXI2 618 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 KRT78Q8N1N4 520 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 LPPQ93052 612 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 CYFIP2Q96F07 1278 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 FAM167AQ96KS9 214 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 SAMD11Q96NU1 681 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 UIMC1Q96RL1 719 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 KATNBL1Q9H079 304 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 BCO1Q9HAY6 547 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 TDP1Q9NUW8 608 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 CDC42EP3Q9UKI2 254 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 PCDHA13Q9Y5I0 950 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 IRAK3Q9Y616 596 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 TOPAZ1Q8N9V7 1692 aa6.95□□□□□ -1.3
CKS1B-204ENST00000471245 GOLGB1Q14789 3259 aaKnown RBP6.95□□□□□ -1.3
CKS1B-204ENST00000471245 DHX57Q6P158 1386 aaKnown RBP6.95□□□□□ -1.3
CKS1B-204ENST00000471245 OVOS2A0A0G2JMS6 1433 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms