RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TCHHQ07283 1943 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 C2orf16Q68DN1 1984 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 TISP43B9A030 160 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
HDAC6-218ENST00000470942 TGM5O43548 720 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 FGFR3P22607 806 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 TKTP29401 623 aaKnown RBP17.09■□□□□ 0.33
HDAC6-218ENST00000470942 ENOX2Q16206 610 aaKnown RBP17.09■□□□□ 0.33
HDAC6-218ENST00000470942 IKZF4Q9H2S9 585 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 OLFML3Q9NRN5 406 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 KBTBD4Q9NVX7 518 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 TUBGCP4Q9UGJ1 667 aa17.09■□□□□ 0.33
HDAC6-218ENST00000470942 AGO2Q9UKV8 859 aaKnown RBP17.09■□□□□ 0.33
HDAC6-218ENST00000470942 ANK1P16157 1881 aa17.08■□□□□ 0.33
HDAC6-218ENST00000470942 FRMD3A2A2Y4 597 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 DCXO43602 365 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 FAM189A1O60320 539 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 PPP1R37O75864 691 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 ACOT2P49753 483 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 ASIC1P78348 528 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
HDAC6-218ENST00000470942 RESP18Q5W5W9 173 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 GPR149Q86SP6 731 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 POMGNT1Q8WZA1 660 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 SPATA32Q96LK8 384 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 CLSTN3Q9BQT9 956 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 STRA6Q9BX79 667 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 PLEKHA4Q9H4M7 779 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 MUTYHQ9UIF7 546 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 CPSF3Q9UKF6 684 aaKnown RBP17.08■□□□□ 0.32
HDAC6-218ENST00000470942 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.32
HDAC6-218ENST00000470942 NR2E1Q9Y466 385 aa17.08■□□□□ 0.32
HDAC6-218ENST00000470942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-218ENST00000470942 CCDC195A0A1B0GUA6 201 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 TULP1O00294 542 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-218ENST00000470942 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
HDAC6-218ENST00000470942 C1RP00736 705 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 MCM4P33991 863 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 CASP5P51878 434 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 KRT85P78386 507 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 KCNA1Q09470 495 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 ALCAMQ13740 583 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 POSTNQ15063 836 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 CD302Q8IX05 232 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 KREMEN2Q8NCW0 462 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 CHAMP1Q96JM3 812 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 STYXL1Q9Y6J8 313 aa17.07■□□□□ 0.32
HDAC6-218ENST00000470942 FAM86C2PA6NEL3 165 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 RFPL2O75678 378 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
HDAC6-218ENST00000470942 CYP3A5P20815 502 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 OR1D2P34982 312 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 JADE1Q6IE81 842 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 ANKS3Q6ZW76 656 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 TMEM130Q8N3G9 435 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-218ENST00000470942 LEO1Q8WVC0 666 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-218ENST00000470942 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 FGFBP2Q9BYJ0 223 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 MAGEF1Q9HAY2 307 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 ATP6V1DQ9Y5K8 247 aa17.06■□□□□ 0.32
HDAC6-218ENST00000470942 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-218ENST00000470942 MYO10Q9HD67 2058 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 ADAM12O43184 909 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 ADRB2P07550 413 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 ADSSP30520 456 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 LRPAP1P30533 357 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 AFMP43652 599 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 GUCY2FP51841 1108 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 ZBTB6Q15916 424 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 TMEM31Q5JXX7 168 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 LIN9Q5TKA1 542 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 NOC3LQ8WTT2 800 aaKnown RBP17.05■□□□□ 0.32
HDAC6-218ENST00000470942 SMG7Q92540 1137 aaKnown RBP17.05■□□□□ 0.32
HDAC6-218ENST00000470942 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 C7orf25Q9BPX7 421 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 PYM1Q9BRP8 204 aaKnown RBP17.05■□□□□ 0.32
HDAC6-218ENST00000470942 BLZF1Q9H2G9 400 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 TMEM206Q9H813 350 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 PIDD1Q9HB75 910 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 MTRRQ9UBK8 725 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 CDY1Q9Y6F8 540 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 DENND4AQ7Z401 1863 aa17.05■□□□□ 0.32
HDAC6-218ENST00000470942 C2CD4DB7Z1M9 353 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 H7C4K7 107 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 SYN3O14994 580 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 CASP1P29466 404 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 RAB33AQ14088 237 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms